Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_J19
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.67 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   1.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   1.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.7  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   4.8  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 387 RPVCGSNGVTYKNAQDL 437
           RPVC SNG  Y N  +L
Sbjct: 115 RPVCASNGKIYANHCEL 131


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 8   YRRNHNKT*N*IYNSTDKNSYYNY 79
           Y  N+N   N  YN+  K  Y NY
Sbjct: 97  YNNNYNNNYNNNYNNNYKKLYKNY 120


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 8   YRRNHNKT*N*IYNSTDKNSYYNY 79
           Y  N+N   N  YN+  K  Y NY
Sbjct: 97  YNNNYNNNYNNNYNNNYKKLYKNY 120


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 289 ICVVFARHGDVLNISTANS 233
           +C  F  H D L +STA S
Sbjct: 499 LCTKFLMHKDSLGLSTATS 517


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +2

Query: 14  RNHNKT*N*IYNSTDKNSYYNY*RICNRSY*KFNTGFCKLYDFMSSNFRK*P 169
           R  +K    I N+   ++ YNY    N     +NT + KL  +   N  + P
Sbjct: 73  RERSKEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQIP 124


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 162 FLKLLDIKSYSLQNPV 115
           +  L+D K Y L++PV
Sbjct: 115 YFNLIDTKCYKLEHPV 130


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 162 FLKLLDIKSYSLQNPV 115
           +  L+D K Y L++PV
Sbjct: 120 YFNLIDTKCYKLEHPV 135


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 162 FLKLLDIKSYSLQNPV 115
           +  L+D K Y L++PV
Sbjct: 120 YFNLIDTKCYKLEHPV 135


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +3

Query: 375 SLEWRPVCGSNGVTYKNAQDLLCSQFCGIDVQFKKNDSM 491
           +L + P+  S+G+ Y N    + SQF   +VQ++ ++ +
Sbjct: 262 NLYYSPLA-SHGLYYVNTAPFMKSQFGENNVQYQGSEDI 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,830
Number of Sequences: 438
Number of extensions: 2804
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)