Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J18
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 27 4.1
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 27 4.1
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 27 4.1
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 27 7.2
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 26 9.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 26 9.5
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 26 9.5
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical
protein F28B1.2 protein.
Length = 973
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Frame = -3
Query: 417 FGQLKVGNVELSCELHN-----YTCDIFLVIRE 334
FG LK+G+ ++C+ H YTC +F IR+
Sbjct: 202 FGNLKLGDASITCKPHTDNKLYYTCGMFKSIRK 234
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 31 PRLSVTPPVIIPILANSAAPAETS 102
P + PPV++P+LA S P +T+
Sbjct: 279 PVVLTNPPVVVPVLATSEEPNDTT 302
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 31 PRLSVTPPVIIPILANSAAPAETS 102
P VTPPV+ P + S AP E S
Sbjct: 646 PSTPVTPPVLRPAFSESKAPQEPS 669
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 31 PRLSVTPPVIIPILANSAAPAETS 102
P VTPPV+ P + S AP E S
Sbjct: 548 PSTPVTPPVLRPAFSESKAPQEPS 571
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 7 PKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASLK 126
PKP+ VP V+PPVI+PI +S PA + + +++
Sbjct: 699 PKPD--PVPAKPVSPPVIVPI--DSIVPAPVVEDKSRTVE 734
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 1 APPKPEI----IDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 129
APP P I + R + TP PI ANS AP+ + A+ P
Sbjct: 342 APPPPGIPYNSVAAGRSTTTPVPSTPISANSPAPSLAQAAPIAAASP 388
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 1 APPKPEI----IDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 129
APP P I + R + TP PI ANS AP+ + A+ P
Sbjct: 342 APPPPGIPYNSVAAGRSTTTPVPSTPISANSPAPSLAQAAPIAAASP 388
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 31 PRLSVTPPV-IIPILANSAAPAETSDSDAASLKP 129
P L PV IIP ++N++ P DSD +P
Sbjct: 882 PDLPTAAPVSIIPSMSNTSFPEAVRDSDTVPCEP 915
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 1 APPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSD 111
+PP ++DV SV +P L +S+ ++T D D
Sbjct: 281 SPPNWAMVDVHEHSVASSFSLPSLPDSSPSSDTPDDD 317
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 31 PRLSVTPPV-IIPILANSAAPAETSDSDAASLKP 129
P L PV IIP ++N++ P DSD +P
Sbjct: 882 PDLPTAAPVSIIPSMSNTSFPEAVRDSDTVPCEP 915
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 1 APPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSD 111
+PP ++DV SV +P L +S+ ++T D D
Sbjct: 281 SPPNWAMVDVHEHSVASSFSLPSLPDSSPSSDTPDDD 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.131 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,660,378
Number of Sequences: 27780
Number of extensions: 93056
Number of successful extensions: 259
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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