Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_J18
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   3.2  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   7.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   7.5  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   7.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 414 GQLKVGNVELSCELHNYTC 358
           G+L V ++E S ++H Y C
Sbjct: 191 GELLVHSLEFSDQIHGYRC 209


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 414 GQLKVGNVELSCELHNYTC 358
           G+L V ++E S ++H Y C
Sbjct: 191 GELLVHSLEFSDQIHGYRC 209


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 419 ILANLRLVTLS*AANCTTIHVTFFLLSVNNHKPW 318
           +L  + LVTLS       ++V F   S +N  PW
Sbjct: 316 LLFTMILVTLSIWITVCVLNVHFRSPSTHNMSPW 349


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 340 DNKKNVTCIVVQFAAQLN 393
           D  + VTC ++ F  Q+N
Sbjct: 39  DRHRRVTCDLLSFKGQVN 56


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 340 DNKKNVTCIVVQFAAQLN 393
           D  + VTC ++ F  Q+N
Sbjct: 39  DRHRRVTCDLLSFKGQVN 56


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 340 DNKKNVTCIVVQFAAQLN 393
           D  + VTC ++ F  Q+N
Sbjct: 14  DRHRRVTCDLLSFKGQVN 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.131    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,088
Number of Sequences: 438
Number of extensions: 1229
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)