Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J16
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 185 2e-47
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 177 5e-45
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 157 1e-38
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 153 1e-37
02_02_0120 + 6984482-6984643,6984748-6984797,6984936-6984996,698... 40 0.002
05_01_0214 - 1615519-1616775 31 0.62
10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844... 29 2.5
03_01_0366 - 2848449-2849032,2849155-2849233,2849346-2849608,284... 29 3.3
08_02_1101 - 24308433-24308978,24309195-24309364,24309443-243095... 29 4.4
08_02_0657 - 19749835-19751942,19753123-19753561 29 4.4
02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204 29 4.4
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 28 5.8
01_07_0337 + 42838260-42838344,42838972-42839084,42839652-428397... 28 5.8
01_06_0685 - 31218716-31218873,31218974-31219266,31219366-312195... 28 5.8
12_02_1243 + 27300978-27301682 28 7.7
09_04_0181 + 15371687-15372011,15372105-15372214 28 7.7
02_02_0535 - 11292509-11294679,11294971-11295040,11295268-112953... 28 7.7
>07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 185 bits (451), Expect = 2e-47
Identities = 100/219 (45%), Positives = 131/219 (59%)
Frame = +2
Query: 8 ESDFVGPSFETXXXXXXXXXXXHYSPSREGEQTVINPGSMFLLDSGGQYRDGTTDITRTR 187
+ F+ SF+T HY P+ E +V ++FLLDSG QY DGTTDITRT
Sbjct: 476 QDGFIDTSFDTISGYGANGAIIHYRPTPESCSSV-GSDNLFLLDSGAQYIDGTTDITRTV 534
Query: 188 HMSRKPTDDQKGAFTRVLKGQMMIGSALFPKGVKGNVLDSFARHSLWDVGLDYAHGTGHG 367
H +PT QK FTRVL+G + + A+FP+ G VLD AR SLW +GLDY HGTGHG
Sbjct: 535 HFG-EPTPRQKECFTRVLQGHIALDQAVFPERTPGFVLDVLARSSLWKIGLDYRHGTGHG 593
Query: 368 VGHYLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGYYKVGEYGIRHEDLVETVTVTKES 547
VG LNVHEGP +S+R Y + L+ G I+SNEPGYY+ +GIR +E + + KE
Sbjct: 594 VGAALNVHEGPQSISYR-YGNLTALQKGMIVSNEPGYYEDNSFGIR----IENLLLVKE- 647
Query: 548 DHPKAKNLLGDYDGRGVLGFNTLTLVPNQRECIDVTMLN 664
NL + G LGF LT VP Q + +D+++L+
Sbjct: 648 -----VNLPNSFGGVSYLGFEKLTFVPIQSKLVDLSLLS 681
>11_05_0099 - 19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 177 bits (432), Expect = 5e-45
Identities = 95/215 (44%), Positives = 125/215 (58%)
Frame = +2
Query: 17 FVGPSFETXXXXXXXXXXXHYSPSREGEQTVINPGSMFLLDSGGQYRDGTTDITRTRHMS 196
F G SF T HYSP ++ ++L DSG QY DGTTDITRT H
Sbjct: 454 FKGLSFPTISSVGPNAAVIHYSPEASS-CAELDADKIYLCDSGAQYLDGTTDITRTVHFG 512
Query: 197 RKPTDDQKGAFTRVLKGQMMIGSALFPKGVKGNVLDSFARHSLWDVGLDYAHGTGHGVGH 376
KP++ +K +T VLKG + + SA+FP G G+ LD AR LW GLDY HGTGHG+G
Sbjct: 513 -KPSEHEKSCYTAVLKGHIALDSAVFPNGTTGHALDILARTPLWRSGLDYRHGTGHGIGS 571
Query: 377 YLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGYYKVGEYGIRHEDLVETVTVTKESDHP 556
YLNVHEGP +S+RP + L+A +++EPGYY+ G +GIR +E V + KE++
Sbjct: 572 YLNVHEGPHLISFRPSARNIPLQASMTVTDEPGYYEDGSFGIR----LENVLIVKEAN-- 625
Query: 557 KAKNLLGDYDGRGVLGFNTLTLVPNQRECIDVTML 661
K GD +G L F +T P Q + ID T+L
Sbjct: 626 -TKYNFGD---KGYLAFEHITWAPYQTKLIDTTLL 656
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 157 bits (380), Expect = 1e-38
Identities = 81/179 (45%), Positives = 110/179 (61%)
Frame = +2
Query: 125 MFLLDSGGQYRDGTTDITRTRHMSRKPTDDQKGAFTRVLKGQMMIGSALFPKGVKGNVLD 304
+ LL Y DGTTDITRT H KP++ +K +T VLKG + + +A+FP G G+ +D
Sbjct: 411 VLLLSRKHMYLDGTTDITRTVHFG-KPSEHEKSCYTAVLKGHIALDTAVFPNGTTGHAID 469
Query: 305 SFARHSLWDVGLDYAHGTGHGVGHYLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGYYK 484
AR LW GLDY HGTGHG+G YLNVHEGP +S+RP + L+A +++EPGYY+
Sbjct: 470 ILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYE 529
Query: 485 VGEYGIRHEDLVETVTVTKESDHPKAKNLLGDYDGRGVLGFNTLTLVPNQRECIDVTML 661
G +GIR +E V + KE++ K GD +G L F +T P Q + ID T+L
Sbjct: 530 DGSFGIR----LENVLIVKEAN---TKFNFGD---KGYLAFEHITWTPYQTKLIDTTLL 578
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 153 bits (371), Expect = 1e-37
Identities = 78/171 (45%), Positives = 107/171 (62%)
Frame = +2
Query: 149 QYRDGTTDITRTRHMSRKPTDDQKGAFTRVLKGQMMIGSALFPKGVKGNVLDSFARHSLW 328
+Y DGTTDITRT H KP++ +K +T VLKG + + +A+FP G G+ LD AR LW
Sbjct: 445 EYLDGTTDITRTVHFG-KPSEHEKSCYTAVLKGHIALDTAVFPNGTTGHALDILARTPLW 503
Query: 329 DVGLDYAHGTGHGVGHYLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGYYKVGEYGIRH 508
GLDY HGTGHGVG YL VHEGP +S+RP + L+A +++EPGYY+ G +GIR
Sbjct: 504 KSGLDYRHGTGHGVGSYLTVHEGPHQISFRPSARNVPLQASMTVTDEPGYYQDGSFGIR- 562
Query: 509 EDLVETVTVTKESDHPKAKNLLGDYDGRGVLGFNTLTLVPNQRECIDVTML 661
+E V + ++++ K GD +G L F +T P Q + ID T+L
Sbjct: 563 ---LENVLIVQDAN---TKFNFGD---KGYLAFEHITWAPYQTKLIDATLL 604
>02_02_0120 +
6984482-6984643,6984748-6984797,6984936-6984996,
6985574-6985669,6985754-6985903,6986208-6986339,
6986641-6986768,6987285-6987327,6987935-6988018,
6989049-6989090,6989264-6989334,6989621-6989674,
6989789-6989894,6990038-6990106,6990824-6990967,
6992038-6992113,6992295-6992353
Length = 508
Score = 39.5 bits (88), Expect = 0.002
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Frame = +2
Query: 74 HYSPSREGEQTVINPGSMFLLDSGGQYRDGTTDITRTRHMSRKPTDDQKGAFTRVLKGQM 253
HY + +N G M L+D GG+Y +DIT + ++ K +Q + VLK
Sbjct: 264 HYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFNSNQTIVYNAVLKAHN 323
Query: 254 MIGSALFP--------KGVKGNVLDSFARHSL--WDVGLDYAHGTG-----HGVGHYLNV 388
+ + + P K + +L+S + DV A G HG+GH L +
Sbjct: 324 AVIAHMRPGVNWLDMHKLAEQTILESLKNERILHGDVTDMMAQRLGAVFMPHGLGHLLGI 383
Query: 389 --HEGPSGVSWRPYPHDPG---------LKAGQILSNEPGYY 481
H+ P +PG LK G +++ EPG Y
Sbjct: 384 DTHDPGGYPEGLERPKEPGLSSLRTIRELKEGMVITVEPGCY 425
>05_01_0214 - 1615519-1616775
Length = 418
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 332 VGLDYAHGTGHGVGHYLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGY 478
+G D+ HG GHG GH + H+ G S + H + G + +E G+
Sbjct: 180 LGHDHGHGHGHGHGHG-HSHDHDHGGSDHDHHHHEDQEHGHVHHHEDGH 227
>10_05_0036 +
8443957-8444112,8446063-8446129,8446685-8446743,
8446855-8446930,8447118-8447189,8447326-8447413,
8447489-8447744,8447934-8448049,8448247-8448470,
8448685-8448716,8448882-8449018,8449200-8449289,
8449383-8449557
Length = 515
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +1
Query: 82 PLKGGRTDGDKS---WLH-VPPGFRWTVQGWNDRYNKDTAY 192
P + G+ GD++ WL+ VP R + DRYNK T Y
Sbjct: 372 PFRNGQPIGDRANSIWLYIVPRSMRILMNYVKDRYNKPTVY 412
>03_01_0366 -
2848449-2849032,2849155-2849233,2849346-2849608,
2849742-2849862
Length = 348
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 344 YAHGTGHGVGHYLNVHEGPSGVSWRPYPHD 433
Y G G GVG Y N + G +G + P+P+D
Sbjct: 283 YGGGNGDGVG-YANPNAGGAGGYYHPHPND 311
>08_02_1101 -
24308433-24308978,24309195-24309364,24309443-24309542,
24310337-24310500,24310960-24310996,24311222-24311262,
24313877-24314093
Length = 424
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 350 HGTGHGVGHYLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGYYKVGEYGIRH 508
H +G+ G N + + + PY + G+ G LS GY +GEYG+++
Sbjct: 277 HSSGNDYGGLANAYSNYNSGGFGPY-RNHGVYGGGSLS---GYGGIGEYGVQY 325
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 436 GIMRVRPPGDAGRTLVDVQVVPDTVSGAVCVVQPDVPQGMTGET 305
GI+ PPG G+TL+ + ++ + V V P++ GM GE+
Sbjct: 251 GILLYGPPG-TGKTLLARAIAAESGAHFVVVNGPEIMSGMPGES 293
>02_05_0724 + 31239139-31239382,31239477-31239798,31239895-31240204
Length = 291
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 350 HGTGHGVGHYLNVHEGPSGVSWRPYPHDPGLKAGQILSNEPGYYKVGE 493
HG GHG G + H G G P H P L G S +Y G+
Sbjct: 30 HGLGHGHGRWRAPHVGGHGQGQGPQQHAP-LGGGGWSSAHATFYGGGD 76
>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 173 ITRTRHMSRKPTDDQKGAFTRVLKGQMMIGSALFPKGVKGNVLDS 307
IT+T+ + R+ T K + +GS L P+G GN DS
Sbjct: 2513 ITKTKKLIRRHTKKIKSKVPKGAATSQELGSELPPRGPSGNQTDS 2557
>01_07_0337 +
42838260-42838344,42838972-42839084,42839652-42839729,
42839831-42840054,42840084-42840128,42840156-42840264
Length = 217
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 193 HMPCP-CYICRSIPVLSTGIQEEH 125
+ PCP CYI +P + +QEEH
Sbjct: 36 YFPCPFCYIEVEVPFICNHLQEEH 59
>01_06_0685 -
31218716-31218873,31218974-31219266,31219366-31219559,
31219666-31220409,31221504-31221824
Length = 569
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 449 GQILSNEPGYYKVGEYGIRH 508
G L N PG + +G+YG RH
Sbjct: 109 GTYLRNGPGLWNLGDYGFRH 128
>12_02_1243 + 27300978-27301682
Length = 234
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 335 GLDYAHGTGHGVGHYLNVHEGPSGVSWRPYPHDPG 439
G Y +G GHG GH H G + + P PG
Sbjct: 173 GFPYGYGHGHGHGHGHAFHGGHAHAAAAPRHGPPG 207
>09_04_0181 + 15371687-15372011,15372105-15372214
Length = 144
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 329 DVGLDYAHGTGHGVGHYLNVHEGPSGVS 412
D+GL G G G+G L V G GVS
Sbjct: 37 DIGLGSGQGIGLGIGLGLGVRAGTGGVS 64
>02_02_0535 -
11292509-11294679,11294971-11295040,11295268-11295324,
11298629-11298789,11299123-11299156
Length = 830
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +1
Query: 4 G*IGFRGTVFRDHSG-SWCQRGYYPLQPLKGGR--TDGDKSWLHVP 132
G I G++ R S W Q Y+P QP+ G D + W P
Sbjct: 96 GIISHGGSISRQSSTPDWAQDSYWPTQPIFGAEQGLDNESRWSQPP 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,840,543
Number of Sequences: 37544
Number of extensions: 458647
Number of successful extensions: 1334
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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