Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J14
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0727 - 35766252-35766481,35766592-35766721,35767049-357671... 29 0.56
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 29 0.98
05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078,258... 28 1.7
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 27 3.0
06_03_1348 - 29497084-29497384,29497464-29497634,29497717-294985... 27 3.0
06_01_1148 + 9629630-9629759,9629848-9630581,9630660-9631121,963... 27 3.0
05_07_0218 + 28470325-28470454,28470543-28471276,28471355-284718... 27 3.0
04_03_0472 - 16316440-16316740,16317046-16317614 27 3.0
02_05_0268 - 27302734-27303034,27303114-27303284,27303367-273041... 27 3.0
01_02_0132 + 11444480-11444609,11444698-11445131,11445210-114454... 27 3.0
12_02_0109 + 13701488-13701787,13701928-13701981,13702065-13702133 26 5.2
06_01_1116 + 9197761-9199956 26 5.2
03_02_0495 - 8879612-8880283,8880369-8880608,8880713-8880775,888... 26 5.2
06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636... 26 6.9
05_06_0001 + 24769633-24770148 26 6.9
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 26 6.9
01_06_1783 + 39845998-39846174,39846260-39846534,39846758-398468... 26 6.9
01_06_1092 + 34469732-34470118 26 6.9
10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697 25 9.2
06_02_0239 + 13384451-13387124,13387234-13387631 25 9.2
06_02_0221 - 13209197-13209247,13209605-13209893,13209976-132101... 25 9.2
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 25 9.2
02_04_0337 + 22131790-22132245,22132481-22132565,22132625-22132686 25 9.2
02_01_0679 - 5048653-5051394 25 9.2
>03_06_0727 -
35766252-35766481,35766592-35766721,35767049-35767116,
35767179-35767217,35767677-35767761,35768097-35768197,
35768292-35768511
Length = 290
Score = 29.5 bits (63), Expect = 0.56
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 51 EADPCVCTFIYAPVCGTDGNTYPNKCSLECS-RPLAPSL-------EMKHRGECQEVEVA 206
+ D V +Y P GT P K S+E +P+ + EM + Q + +
Sbjct: 35 QGDTIVLAAVYGPKPGTRKGENPEKASIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICLL 94
Query: 207 DIQPCICTREIKQVCGSDG 263
+ P T I QV G+DG
Sbjct: 95 TVHPNTTTSVILQVVGNDG 113
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 28.7 bits (61), Expect = 0.98
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 226 QIHGCISATSTSWHSPRCFISRDGANGREHSSEH 125
Q+HG ++ SWH R I+ D A G E+ EH
Sbjct: 314 QLHGSSHGSTLSWHI-RMKIALDTARGLEYLHEH 346
>05_01_0329 -
2580083-2580115,2580787-2580864,2580986-2581078,
2581209-2581326,2583350-2583440,2585167-2585207,
2585854-2585981,2586078-2586353,2587318-2587472,
2587557-2587700,2587991-2588567
Length = 577
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 277 LP*VTPSLPQTCLISRVQIHGCISATSTSWHSPR 176
LP + P +P TCL R +H S+T T H+ +
Sbjct: 198 LPTLLPCVPDTCLTDRNLLHIRESSTKTVLHAAK 231
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 103 SVPQTGAYMKVQTQGSASSHVPS 35
S Q G+ M+ Q+QG ASS +PS
Sbjct: 1668 STVQNGSQMQQQSQGPASSAIPS 1690
>06_03_1348 -
29497084-29497384,29497464-29497634,29497717-29498549,
29498631-29499092,29499171-29499904,29499993-29500122
Length = 876
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI 212
P KC L P P+L + H ++++ADI
Sbjct: 543 PPKCKLSIEAPRGPALSVPHSPGGADMDLADI 574
>06_01_1148 +
9629630-9629759,9629848-9630581,9630660-9631121,
9631203-9632035,9632118-9632288,9632368-9632668
Length = 876
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI 212
P KC L P P+L + H ++++ADI
Sbjct: 543 PPKCKLSIEAPRGPALSVPHSPGGADMDLADI 574
>05_07_0218 +
28470325-28470454,28470543-28471276,28471355-28471816,
28471898-28472730,28472813-28472983,28473063-28473180
Length = 815
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI 212
P KC L P P+L + H ++++ADI
Sbjct: 543 PPKCKLSIEAPRGPALSVPHSPGGADMDLADI 574
>04_03_0472 - 16316440-16316740,16317046-16317614
Length = 289
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI 212
P KC L P P+L + H ++++ADI
Sbjct: 13 PPKCKLSIEAPRGPALSVPHSPGGADMDLADI 44
>02_05_0268 -
27302734-27303034,27303114-27303284,27303367-27304199,
27304281-27304742,27304821-27305554,27305643-27305772
Length = 876
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI 212
P KC L P P+L + H ++++ADI
Sbjct: 543 PPKCKLSIEAPRGPALSVPHSPGGADMDLADI 574
>01_02_0132 +
11444480-11444609,11444698-11445131,11445210-11445431,
11445510-11445971,11446053-11446885,11446968-11447138,
11447218-11447518
Length = 850
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI 212
P KC L P P+L + H ++++ADI
Sbjct: 517 PPKCKLSIEAPRGPALSVPHSPGGADMDLADI 548
>12_02_0109 + 13701488-13701787,13701928-13701981,13702065-13702133
Length = 140
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 8 DAQRFENRERGYV*GSRSLRLYLHICPGLWHRREH 112
D + +E+ ++G+V G+R++ YL + P + H
Sbjct: 49 DVRMWEDFDKGHVAGARNVPYYLSVTPRAKEKNPH 83
>06_01_1116 + 9197761-9199956
Length = 731
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 PNKCSLECSRPLAPSLEMKHRGECQEVEVADI-QPCICTREI 239
P KCS+ CS P+L + C +A I Q CT +I
Sbjct: 63 PAKCSMNCS---TPNLTVAAMVSCTSTSLASICQDITCTTDI 101
>03_02_0495 -
8879612-8880283,8880369-8880608,8880713-8880775,
8881510-8881620
Length = 361
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 235 SRVQIHGCISATSTSWHS 182
+RV+ H CIS++ WHS
Sbjct: 296 ARVKKHACISSSIIGWHS 313
>06_01_0838 -
6360232-6360460,6360571-6360719,6360825-6360933,
6361446-6362276,6362865-6362969,6363084-6363180,
6363303-6363341,6363435-6363477
Length = 533
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 217 GCISATSTSWHSPRCFISRDGANGREHSSE 128
GCI+ + T H+ CF+ A+G + E
Sbjct: 305 GCIAISMTLHHTSLCFVCSHLASGEKEGDE 334
>05_06_0001 + 24769633-24770148
Length = 171
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 188 PGS*SCRYTAMYLHAGDQTGLR*RRRHLRQPVPVELRH 301
P S CR A L + LR R R L PVE RH
Sbjct: 13 PSSLECRLAAPSLPSASSRRLRRRPRLLAARRPVERRH 50
>04_04_0959 +
29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = -2
Query: 301 VAQFNRHGLP*VTPSLPQTCLISRVQIHGCISATSTSWHSPRCFISRDGANGREHSSEHL 122
+ +F HG+ + + + I G + ++S+H PR + D E+S+ L
Sbjct: 357 IGEFTDHGICIIDHDKNLVIVHPELLISG--TRVASSFHCPRRSVLDDRLKSNEYSTSAL 414
Query: 121 LG*VFPSVPQTG 86
+G + V Q G
Sbjct: 415 IGTLLHQVFQAG 426
>01_06_1783 +
39845998-39846174,39846260-39846534,39846758-39846891,
39846992-39847116,39847312-39847494,39847610-39847644,
39847756-39847912,39847936-39848049,39848143-39848235,
39848316-39848455,39848606-39848676,39848759-39848839,
39851475-39851954,39852110-39852387,39853346-39854143
Length = 1046
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +3
Query: 87 PVCGTDGNTY------PNKCSLECSRPLAPSLEMKHRGECQEVEVA 206
P G+DG+ P + S PLA S+ + RGEC +E A
Sbjct: 86 PATGSDGDKRKAVVPAPKTGCAKSSAPLASSIAVAERGECTFLEKA 131
>01_06_1092 + 34469732-34470118
Length = 128
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 204 ADIQPCICTREIKQVCGSDGVTYGNPC 284
A + P C R VCG+DGVTY C
Sbjct: 53 AQLCPVRCFRP-DPVCGADGVTYWCGC 78
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 51 EADPC-VCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQ 191
EA C V F PVCG DG TY C C + RG C+
Sbjct: 52 EAQLCPVRCFRPDPVCGADGVTY--WCG--CPEAACAGARVARRGYCE 95
>10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697
Length = 375
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 51 EADPCVCTFIYAPVCGTDGNTYPNKCS 131
E DPC C CG+ G P C+
Sbjct: 24 ECDPCACAATAGSPCGSCGAPPPWACA 50
>06_02_0239 + 13384451-13387124,13387234-13387631
Length = 1023
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 70 VPSYMPRSVAQTGTLTLINVHWSVL 144
+ Y+P S+ + +LTL+N+ +++L
Sbjct: 389 ITGYIPASIGRLSSLTLLNMSYNLL 413
>06_02_0221 -
13209197-13209247,13209605-13209893,13209976-13210146,
13210257-13211110,13211197-13211643,13211722-13212021,
13212130-13212450
Length = 810
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 177 RGECQEVEVADIQPCICTREIKQVCGSDGVTYGNPC 284
RG+C +V+V ++P +K + + ++ GN C
Sbjct: 395 RGDCAKVQVDSVKPEYELFPLKYLSNDEVLSLGNAC 430
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 63 CVCTF-IYAPVCGTDGNTYPNKCSLEC 140
C+C + P+C G+T+ +C LEC
Sbjct: 1186 CLCLKPLIHPLCCPKGHTFCKECILEC 1212
>02_04_0337 + 22131790-22132245,22132481-22132565,22132625-22132686
Length = 200
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 222 YMAVYRQ-LQLPGIRRDVSSLETALTVENTP 133
Y+ V+R LQ +R D+S+ L+++ TP
Sbjct: 147 YLKVWRMTLQASSLRADISNSSEELSIDTTP 177
>02_01_0679 - 5048653-5051394
Length = 913
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 234 PACRYMAVYRQLQLPGIRRDVSSLETALTVENTPVNI 124
P R + +R ++LP D++ L+T TVE T ++
Sbjct: 660 PEERQLRYFRGVKLPDCAFDLAQLQTLQTVEATKESV 696
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,915,741
Number of Sequences: 37544
Number of extensions: 179303
Number of successful extensions: 592
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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