Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J14
(308 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 57 3e-09
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 57 3e-09
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 48 1e-06
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 32 0.094
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 31 0.12
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 0.66
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 28 1.2
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 1.5
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z74039-3|CAA98502.1| 410|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 27 3.5
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 27 3.5
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 27 3.5
AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical ... 26 4.7
AF016662-3|AAB66057.1| 461|Caenorhabditis elegans Hypothetical ... 26 4.7
Z73422-8|CAA97771.3| 240|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 26 6.2
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 26 6.2
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 26 6.2
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 26 6.2
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 26 6.2
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 25 8.1
U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical pr... 25 8.1
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 56.8 bits (131), Expect = 3e-09
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Frame = +3
Query: 27 IVKEGTCEEAD-PCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSL-EMKHRGEC---- 188
+VK E + P C + PVC T+G T+ N+C ++ S+ ++KH+G C
Sbjct: 382 VVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGV 441
Query: 189 ----------QEVEVADIQP-CIC---TREIKQVCGSDGVTYGNPCLLNCA 299
Q V D +P C+C T E K+VCGSDG TY N C L A
Sbjct: 442 CATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNA 492
Score = 41.1 bits (92), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Frame = +3
Query: 69 CTFIYAPVCGTDGNTYPNKCSLECSRPLAP-SLEMKHRGECQ------------------ 191
CT + VCG+DG TY N+C L+ + +A ++ +K+ C+
Sbjct: 468 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVG 527
Query: 192 -----EVEVADIQPCICTREIKQVCGSDGVTYGNPC 284
E + D P E K+VCG+DGVTY + C
Sbjct: 528 ENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSEC 563
Score = 35.5 bits (78), Expect = 0.008
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 69 CTFIYAPVCGTDGNTYPNKCSLECSR-PLAPSLEMKHRGECQE 194
CT A VCGTDG TY N+C L+ + + + RG C E
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDE 365
Score = 33.1 bits (72), Expect = 0.041
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 30/107 (28%)
Frame = +3
Query: 63 CVCTF-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMK----HRGECQEVEV 203
CVC++ + A +CG +G YP+ C L+ + + AP EM H + +
Sbjct: 603 CVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPPSHCHSSKTSFPDF 662
Query: 204 ADIQPCIC--------------TREIKQ---VCGSDGVTYGNPCLLN 293
+PC C T + +CGSDG+ Y N C LN
Sbjct: 663 KVRRPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLN 709
Score = 32.3 bits (70), Expect = 0.071
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 16/87 (18%)
Frame = +3
Query: 90 VCGTDGNTYPNKCSLECSRPLAPSLEM-KHRGECQEV--------EVADIQPCICTREI- 239
VCGTDG TY ++C ++ S M G+C E E C+C+
Sbjct: 551 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 610
Query: 240 ------KQVCGSDGVTYGNPCLLNCAT 302
++CG +GV Y + C L A+
Sbjct: 611 ANPPLSARICGENGVLYPSLCHLQLAS 637
Score = 31.9 bits (69), Expect = 0.094
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 225 CTREIKQVCGSDGVTYGNPCLLNCA 299
CT VCG+DG TY N C L A
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLA 347
Score = 28.7 bits (61), Expect = 0.87
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 90 VCGTDGNTYPNKCSLE 137
VCG+DG TY N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 246 VCGSDGVTYGNPCLL 290
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 56.8 bits (131), Expect = 3e-09
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Frame = +3
Query: 27 IVKEGTCEEAD-PCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSL-EMKHRGEC---- 188
+VK E + P C + PVC T+G T+ N+C ++ S+ ++KH+G C
Sbjct: 390 VVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGV 449
Query: 189 ----------QEVEVADIQP-CIC---TREIKQVCGSDGVTYGNPCLLNCA 299
Q V D +P C+C T E K+VCGSDG TY N C L A
Sbjct: 450 CATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNA 500
Score = 41.1 bits (92), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Frame = +3
Query: 69 CTFIYAPVCGTDGNTYPNKCSLECSRPLAP-SLEMKHRGECQ------------------ 191
CT + VCG+DG TY N+C L+ + +A ++ +K+ C+
Sbjct: 476 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVVG 535
Query: 192 -----EVEVADIQPCICTREIKQVCGSDGVTYGNPC 284
E + D P E K+VCG+DGVTY + C
Sbjct: 536 ENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSEC 571
Score = 35.5 bits (78), Expect = 0.008
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 69 CTFIYAPVCGTDGNTYPNKCSLECSR-PLAPSLEMKHRGECQE 194
CT A VCGTDG TY N+C L+ + + + RG C E
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDE 373
Score = 32.3 bits (70), Expect = 0.071
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 16/87 (18%)
Frame = +3
Query: 90 VCGTDGNTYPNKCSLECSRPLAPSLEM-KHRGECQEV--------EVADIQPCICTREI- 239
VCGTDG TY ++C ++ S M G+C E E C+C+
Sbjct: 559 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 618
Query: 240 ------KQVCGSDGVTYGNPCLLNCAT 302
++CG +GV Y + C L A+
Sbjct: 619 ANPPLSARICGENGVLYPSLCHLQLAS 645
Score = 31.9 bits (69), Expect = 0.094
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 225 CTREIKQVCGSDGVTYGNPCLLNCA 299
CT VCG+DG TY N C L A
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLA 355
Score = 28.7 bits (61), Expect = 0.87
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 90 VCGTDGNTYPNKCSLE 137
VCG+DG TY N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Frame = +3
Query: 63 CVCTF-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECQEVEVADIQ 215
CVC++ + A +CG +G YP+ C L+ + + AP EM C + +
Sbjct: 611 CVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPD 669
Query: 216 PCICTR 233
C C R
Sbjct: 670 SCQCNR 675
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 246 VCGSDGVTYGNPCLL 290
VCGSDG TY N C L
Sbjct: 819 VCGSDGTTYSNLCEL 833
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 48.4 bits (110), Expect = 1e-06
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Frame = +3
Query: 3 DKTHSD-LKIVKEGTCEEADPC--VCTFIYAPVCGTDGNTYPNKCSLECSRPLAPS---- 161
++T D L I K C E C C Y+PVC ++G N+C L+ R L +
Sbjct: 847 ERTFGDVLTIDKFEVCNEVKECNNACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTT 906
Query: 162 ---LEMKHRGECQEVEVADIQPCICTREIKQVCGSDGVTYGNPCLLN 293
L + GEC +E DI VC ++GVT+ N CL++
Sbjct: 907 GDKLVKDYDGECCRIENCDIS------VFSPVCDTEGVTHANMCLMD 947
Score = 41.9 bits (94), Expect = 9e-05
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 69 CTFIYAPVCGTDGNTYPNKCSL--ECSRPLAPSLEMKHRGECQEVEVADIQPCICTREIK 242
C Y P+CGT+G T+ N CSL E ++E+ + G C + C +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFS 823
Query: 243 QVCGSDGVTYGNPC 284
VC S G T+ N C
Sbjct: 824 PVCDSKGSTHQNIC 837
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +3
Query: 63 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVEVADIQPCICTREIK 242
C C + PVCGTD TY N C L C + L + G C + + C +
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKE-------CEKVGT 71
Query: 243 QVCGSDGVTYGNPC 284
+C + G T+ N C
Sbjct: 72 PICDNFGETHINDC 85
Score = 38.7 bits (86), Expect = 8e-04
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 21 LKIVKEGTCEEADPCV--CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQE 194
+ I E C + C CT P+C +D +TY N C + L LE+ +G+C E
Sbjct: 572 IHIATEENCISKEACQMPCTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 219 CICTREIKQVCGSDGVTYGNPCLLNCATQS 308
C C I+ VCG+D VTY N C L C ++
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRT 48
Score = 37.1 bits (82), Expect = 0.002
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +3
Query: 3 DKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPS-----LE 167
+ +S +++ G C + + C ++PVC + G+T+ N C R +A L
Sbjct: 799 ESANSTIEVAYTGMCCDTN---CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLT 855
Query: 168 MKHRGECQEVEVADIQPCICTREIKQVCGSDGVTYGNPCLLN 293
+ C EV+ + C +E VC S+G N C L+
Sbjct: 856 IDKFEVCNEVKECN---NACPKEYSPVCASNGQNIVNECELD 894
Score = 35.1 bits (77), Expect = 0.010
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +3
Query: 87 PVCGTDGNTYPNKCSLECSRPLAPS----LEMKHRGECQEVEVADIQPCICTREIKQVCG 254
PVC + GN + N C SR +A S + + C E + CT + +C
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMP---CTDDKHPICA 599
Query: 255 SDGVTYGNPC 284
SD TY N C
Sbjct: 600 SDFSTYENLC 609
Score = 33.1 bits (72), Expect = 0.041
Identities = 23/91 (25%), Positives = 35/91 (38%)
Frame = +3
Query: 21 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVE 200
L IV G C C T PVC + G T+ + C S+ + + ++ + +
Sbjct: 1059 LNIVHTGECCALASCPKTG--QPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQ 1116
Query: 201 VADIQPCICTREIKQVCGSDGVTYGNPCLLN 293
P CT E+ +C Y N C N
Sbjct: 1117 -GKCCPAGCTDELSVICDQHENIYRNSCYFN 1146
Score = 31.5 bits (68), Expect = 0.12
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = +3
Query: 3 DKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMK--- 173
++ + L I G C C A VC ++G T+ N C + R +A ++ K
Sbjct: 1002 ERVNKTLSIAYSGECCLLPKGECESSGA-VCDSEGQTHMNHCVYQQRRCMAQTISQKTLN 1060
Query: 174 --HRGECQEVEVADIQPCICTREIKQVCGSDGVTYGNPC 284
H GEC + C + + VC S G T+ + C
Sbjct: 1061 IVHTGECCAL-------ASCPKTGQPVCDSRGRTHDSLC 1092
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Frame = +3
Query: 87 PVCGTDGNTYPNKCSL---ECSRPLAPSLE--MKHRGECQEVEVA-----DIQPCICTRE 236
P+C T+P CS C E + H C E +I P C+R+
Sbjct: 319 PICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCSRD 378
Query: 237 IKQVCGSDGVTYGNPC 284
+K VC T+ N C
Sbjct: 379 VKPVCDEANNTHQNLC 394
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVEVA-DIQPCICTREIKQ 245
+ PVC T+G+ Y N C + R L++ E Q +++A D + C+ +RE ++
Sbjct: 124 FDPVCDTNGSVYRNLCVFQMRR---CELQL----ESQRIQLAEDRKFCLRSRETQR 172
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 225 CTREIKQVCGSDGVTYGNPCLL 290
C +CG++GVT+ N C L
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSL 793
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 31.9 bits (69), Expect = 0.094
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 81 YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVEVADIQPCIC--TREIKQVCG 254
+ C G YPN +++C + E K R E+ V+ + C T+E + V
Sbjct: 85 FTVTCNELGAIYPNPSNIDCGESVQ---ERKIRDTTNEM-VSSCKVCFGRGTKECQPVTN 140
Query: 255 SDGVTYGNPCL 287
SDGV G C+
Sbjct: 141 SDGVVQGYKCV 151
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 31.5 bits (68), Expect = 0.12
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +3
Query: 48 EEADPCVCTFIYAPVCGTDGN---TYPNKCSLECSRPLAPSLEMKHRGEC 188
E C C PVC +G TY NKC +C++ L + + G C
Sbjct: 20 EPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSC 69
Score = 31.1 bits (67), Expect = 0.16
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 KTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSL---EC--SRPLAPSLEM 170
K H + +E C PC + PVC G T+ N C+ +C L SLE+
Sbjct: 107 KNHISMDSSQE-KCSCTAPCPTE--WNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEV 163
Query: 171 KHRGECQEVEVADIQPCICTREIKQVCGSDGVTYGNPC 284
+ G C E C + VC S+G T+ + C
Sbjct: 164 DYSGVCCE------DMCSAGQTSLTVCDSEGNTHTDIC 195
Score = 29.5 bits (63), Expect = 0.50
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +3
Query: 219 CICTREIKQVCGSDG---VTYGNPCLLNCATQS 308
C C EI VC +G TY N C+ CA ++
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQEN 57
Score = 29.5 bits (63), Expect = 0.50
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +3
Query: 3 DKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRG 182
++ + L++ G C E D C VC ++GNT+ + CS +A +M+
Sbjct: 155 NQLNESLEVDYSGVCCE-DMCSAGQTSLTVCDSEGNTHTDICSFY----IAKCRQMRRGI 209
Query: 183 ECQEVEVADIQPC 221
+ +++A + PC
Sbjct: 210 GKKRLQIAGVGPC 222
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 0.66
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 156 PSLEMKHRGECQEVEVADIQPCICTREIKQV-CGSD 260
P E+ H G C E ++ + C C + K V CGSD
Sbjct: 333 PCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSD 368
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Frame = +3
Query: 93 CGTDGNTYPNKCSLECSRPLAPSLE----MKHRGECQEVEVADIQPCICTREIKQV---- 248
CG+D C C + L+ + H G+C E V Q C C + K+V
Sbjct: 365 CGSDQEVM---CETVCGKQLSCGQHNCERICHSGDCGECTVILEQDCFCGKTPKEVSCNP 421
Query: 249 CGSDGVTYGNPC 284
C + + G+ C
Sbjct: 422 CAHEKYSCGSEC 433
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 93 CGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVEVADIQPCICTREIKQVCGSDG-VT 269
C T + S+ P E + +C + + A IC ++ +Q CGS G +
Sbjct: 100 CQTSSCNPMTSTPIPASQSCLPECENRCMQQCTQQQTAQQCQPICQQQCQQECGSTGNMM 159
Query: 270 YGN 278
Y N
Sbjct: 160 YNN 162
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 63 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVEVADIQPCICTREIK 242
C C P C + CS + S P + + ++ +++ + P C +
Sbjct: 28 CGCAQSVQPTCSCQQASQQYSCSCQPSTPCSCASSQQY-----QLQTSQCMPA-CQQSCS 81
Query: 243 QVCGSDGVTYGNP-CLLNCATQS 308
Q C S+ T P C +C T S
Sbjct: 82 QQCQSNTNTQCQPTCQQSCQTSS 104
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 69 CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVEVADIQPCICTREIKQV 248
CT P C +C+ +C +P AP + + + CQ VA P I T E+
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 249 C 251
C
Sbjct: 282 C 282
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 6 KTHSDLKIVKEGTCEEADPCVCT 74
K HS++ I G C++ PC+CT
Sbjct: 459 KEHSEIIIHNLGHCDKHLPCICT 481
>Z74039-3|CAA98502.1| 410|Caenorhabditis elegans Hypothetical
protein K03B8.3 protein.
Length = 410
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 90 VCGTDGNTYPNKCSLECSRPL 152
+CG G T P+KCS EC PL
Sbjct: 268 LCGNGGYTNPSKCS-ECICPL 287
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 21 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLEC 140
L + ++ CE C+ T ++PVC +C EC
Sbjct: 405 LNMCQDFHCENDGTCMHTSDHSPVCQCKNGFIGKRCEKEC 444
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +3
Query: 219 CICTR-EIKQVCGSDGVTYGNPCLLNC--ATQ 305
C C + VC +DG Y +PC C ATQ
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCREATQ 559
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 45 CEEADPCVCTFIYAPVCGTDGNTYPNKCSLEC 140
C C +Y PVC DG Y + C C
Sbjct: 524 CNSQCSCENAHLY-PVCSADGTAYFSPCHAGC 554
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +3
Query: 21 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLEC 140
L + ++ CE C+ T ++PVC +C EC
Sbjct: 405 LNMCQDFHCENDGTCMHTSDHSPVCQCKNGFIGKRCEKEC 444
>AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical
protein F43B10.1 protein.
Length = 311
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 141 SRPLAPSLEMKHRGECQEVEVADIQPCICT 230
+RP L++ H G + +D+QP I T
Sbjct: 152 TRPFMEKLDLSHLGPSDPLRDSDLQPAITT 181
>AF016662-3|AAB66057.1| 461|Caenorhabditis elegans Hypothetical
protein C33C12.5 protein.
Length = 461
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 48 EEADPCVCTFIYAPVCGTDGNTY-PNKCSLEC-SRPLAPSLEM 170
EEA PC + + P C D ++ P+ L+ S P APS +
Sbjct: 89 EEASPCPRSRVAHPTCSIDLTSFSPSPLCLKLFSLPFAPSAHL 131
>Z73422-8|CAA97771.3| 240|Caenorhabditis elegans Hypothetical
protein B0564.1a protein.
Length = 240
Score = 25.8 bits (54), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +3
Query: 36 EGTC--EEADPCVCTFIYAPVCGTDGNTYPNKCSLEC--SRPLAPSLEMKH--RGECQEV 197
EG+C E + V +Y P G +KC++ C S LE K+ RG+ +
Sbjct: 33 EGSCYLEHGNTKVLCAVYGPYEGKSSKRIEDKCAIVCQYSATKFSGLERKNRTRGDRKST 92
Query: 198 EVA 206
E++
Sbjct: 93 EIS 95
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 112 VFPSVPQTGAYMKVQTQGSASSHVP 38
+F + PQ A VQ+ GS+S+H P
Sbjct: 30 MFNTGPQNKALPTVQSSGSSSNHAP 54
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 112 VFPSVPQTGAYMKVQTQGSASSHVP 38
+F + PQ A VQ+ GS+S+H P
Sbjct: 30 MFNTGPQNKALPTVQSSGSSSNHAP 54
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 112 VFPSVPQTGAYMKVQTQGSASSHVP 38
+F + PQ A VQ+ GS+S+H P
Sbjct: 30 MFNTGPQNKALPTVQSSGSSSNHAP 54
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 263 RHLRQPVPVELRHTV 307
+HL QPVP+E RH +
Sbjct: 291 QHLGQPVPLEYRHII 305
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 174 HRGECQEV---EVADIQPCICTREIKQVCGSDGVTYGNPCLLNCATQS 308
H G C ++ A ++ CI + CG N C L C T S
Sbjct: 1020 HVGTCPKITDLNTAKVEKCIQECKTDSDCGQTSKCCWNGCGLTCVTSS 1067
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 100 VPQTGAYMKVQTQGSASSHVPSFTIFKSLCV 8
V TGA++ + Q SA+S+ FTI ++C+
Sbjct: 445 VISTGAFVSFEFQKSATSNGILFTIVLTICM 475
>U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical
protein F52E4.8 protein.
Length = 382
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 103 SVPQTGAYMKVQTQGSASSHVPSFTIFKSL 14
S+ T Y K + + S+VPS T+FK+L
Sbjct: 227 SMKNTFIYGKFIKRSPSESYVPSATVFKTL 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,428,751
Number of Sequences: 27780
Number of extensions: 153085
Number of successful extensions: 463
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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