Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_J10
         (571 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo...    33   0.029
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo...    32   0.068
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa...    30   0.27 
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo...    30   0.27 
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos...    29   0.48 
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi...    29   0.48 
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt...    28   0.84 
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo...    28   0.84 
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k...    28   1.1  
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch...    28   1.1  
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2...    27   1.9  
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |...    27   1.9  
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po...    27   2.6  
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ...    26   3.4  
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha...    26   3.4  
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc...    25   5.9  
SPBC776.11 |rpl2801|rpl28-1|60S ribosomal protein Ll28B 27a|Schi...    25   5.9  
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb...    25   7.8  

>SPAC22E12.14c |sck2||serine/threonine protein kinase
           Sck2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 646

 Score = 33.1 bits (72), Expect = 0.029
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +3

Query: 447 LKTIGTGTFGRVCLCRDKAADEYLAMKNLS 536
           LK IG GTFG+V L R K  +   AMK LS
Sbjct: 269 LKLIGKGTFGQVYLVRKKDTERVYAMKVLS 298


>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 534

 Score = 31.9 bits (69), Expect = 0.068
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 444 ILKTIGTGTFGRVCLCRDKAADEYLAMK 527
           IL T+G GTFG+V  C+D    + +A+K
Sbjct: 132 ILDTLGHGTFGQVARCQDLKTQQIVAIK 159


>SPAC1B9.02c |sck1||serine/threonine protein kinase
           Sck1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 696

 Score = 29.9 bits (64), Expect = 0.27
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 447 LKTIGTGTFGRVCLCRDKAADEYLAMKNLS 536
           L+ IG GTFG+V L R    +   AMK +S
Sbjct: 305 LRLIGKGTFGQVYLVRKNDTNRIYAMKKIS 334


>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 566

 Score = 29.9 bits (64), Expect = 0.27
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 456 IGTGTFGRVCLCRDKAADEYLAMKNLSMADVSV*NK 563
           +G G  GRV L R+K + ++ AMK LS  ++   NK
Sbjct: 201 LGKGDVGRVYLVREKKSGKFYAMKVLSKQEMIKRNK 236


>SPCC1450.11c |cek1||serine/threonine protein kinase
           Cek1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1338

 Score = 29.1 bits (62), Expect = 0.48
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 444 ILKTIGTGTFGRVCLCRDKAADEYLAMKNLSMADVSV*NK 563
           ILK I  G FG V L + +   +Y A+K L  +++   N+
Sbjct: 591 ILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQ 630


>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
           Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 690

 Score = 29.1 bits (62), Expect = 0.48
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 444 ILKTIGTGTFGRVCLCRDKAADEYLAMK 527
           +++ +G GTFG+V  C D++   + A+K
Sbjct: 364 VVRLLGHGTFGKVIQCYDQSTGRHCAIK 391


>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
           subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 512

 Score = 28.3 bits (60), Expect = 0.84
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 447 LKTIGTGTFGRVCLCRDKAADEYLAMKNL 533
           L+T+GTG+FGRV L +      Y A+K L
Sbjct: 204 LQTLGTGSFGRVHLVQSNHNRLYYAIKVL 232


>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 569

 Score = 28.3 bits (60), Expect = 0.84
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 444 ILKTIGTGTFGRVCLCRDKAADEYLAMKNLSMADV 548
           +LK +G G+FG+V   R +      A+K +  A +
Sbjct: 232 LLKVVGKGSFGKVMQVRKRDTSRIYALKTMKKAHI 266


>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
           kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 836

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 444 ILKTIGTGTFGRVCLCRDKAADEYLAMK 527
           I+ T+G G+FG+V  C D    + +A+K
Sbjct: 520 IIDTVGKGSFGQVLKCIDHKRGQVVAIK 547


>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
           Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 297

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 447 LKTIGTGTFGRVCLCRDKAADEYLAMKNLSMADVS 551
           ++ IG GT+G V   R K +   +AMK + + D S
Sbjct: 7   VEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDES 41


>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
           Byr2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 659

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +3

Query: 456 IGTGTFGRVCLCRDKAADEYLAMKNLSMADVS 551
           IG+G+FG+V L  + ++ E +A+K + +  VS
Sbjct: 400 IGSGSFGQVYLGMNASSGELMAVKQVILDSVS 431


>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 652

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 375 VLPRTWKRPPKETARQS*GPNYNPAPFSHLPSSF*KLPTPF 253
           ++PRT ++  +   +Q+  P+ +  P   LPSS    PTPF
Sbjct: 247 IIPRTPQKTVRSIVKQTSSPHSSKMPKHSLPSS----PTPF 283


>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 471

 Score = 26.6 bits (56), Expect = 2.6
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +3

Query: 444 ILKTIGTGTFGRVCLCRDKAADEYLAMKNLSM 539
           +L+ +G+G+FG V   R+  + + +A+K + +
Sbjct: 11  LLRKLGSGSFGVVWKARENVSGDIIAIKQIDL 42


>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1854

 Score = 26.2 bits (55), Expect = 3.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 414  LLLYIQTPLWWNPVLPRTWKRPP 346
            +L Y  TP  W    PR W  PP
Sbjct: 1119 VLEYASTPNNWEVWAPRVWSNPP 1141


>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
           Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 884

 Score = 26.2 bits (55), Expect = 3.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 369 PRTWKRPPKETARQS*GPNYNPAPFSHLPSS 277
           P     PP    R S  P+  PAP +H  SS
Sbjct: 738 PAVKHHPPPPPVRSSISPSMPPAPLTHANSS 768


>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 489

 Score = 25.4 bits (53), Expect = 5.9
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -2

Query: 441 EDLQARIPFLL-LYIQTPLWWNPVLPRTWK 355
           EDL  R P    LY +  + W PV    WK
Sbjct: 51  EDLNGRCPACRRLYTEENVQWRPVTAEEWK 80


>SPBC776.11 |rpl2801|rpl28-1|60S ribosomal protein Ll28B
           27a|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 148

 Score = 25.4 bits (53), Expect = 5.9
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -2

Query: 402 IQTPLWWNPV-LPRTWKRPPKETARQS*GPNYNPAP 298
           ++ PLW   V L R W   P ET  +  G N   AP
Sbjct: 64  MKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAP 99


>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 420

 Score = 25.0 bits (52), Expect = 7.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 302 HHFRTCHHHFKSYRHRSSDD 243
           HH    HHH   + H S DD
Sbjct: 295 HHEGHHHHHHHHHHHHSHDD 314


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,988,634
Number of Sequences: 5004
Number of extensions: 36781
Number of successful extensions: 143
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)