Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J09
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 31 0.66
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 0.66
AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical... 29 2.7
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 29 2.7
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.5
Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF024494-4|AAQ62459.1| 253|Caenorhabditis elegans Hypothetical ... 28 4.7
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 31.1 bits (67), Expect = 0.66
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 464 ELVDRCLEHLNSWQGKLNPRGER 396
ELVDRCL+H + W G+ P ++
Sbjct: 181 ELVDRCLDHCHEWLGQNVPHSQQ 203
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 31.1 bits (67), Expect = 0.66
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 464 ELVDRCLEHLNSWQGKLNPRGER 396
ELVDRCL+H + W G+ P ++
Sbjct: 181 ELVDRCLDHCHEWLGQNVPHSQQ 203
>AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32b protein.
Length = 216
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +1
Query: 157 TKKSKVRSLRKPKHTFKPLTNPTDIQWQRRKARGCRGSKLCQGSLPYPS*NQGLTSPKNC 336
T V R+P+++ P +N TD+Q + A G G GS+ G+ K
Sbjct: 42 TSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYGD---VGSV------YGIAQQKRI 92
Query: 337 TSESRNPTL*SDGISHLV 390
+ R P S+ +H V
Sbjct: 93 WQKPRGPDATSEEFAHSV 110
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +1
Query: 157 TKKSKVRSLRKPKHTFKPLTNPTDIQWQRRKARGCRGSKLCQGSLPYPS*NQGLTSPKNC 336
T V R+P+++ P +N TD+Q + A G G GS+ G+ K
Sbjct: 210 TSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYGD---VGSV------YGIAQQKRI 260
Query: 337 TSESRNPTL*SDGISHLV 390
+ R P S+ +H V
Sbjct: 261 WQKPRGPDATSEEFAHSV 278
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 278 HNFEPRHPRAFRLCHCMSVGFVSGLKVCFG--FLSDRTFDF 162
++FE R+P++ + H M V V GL C LS R++DF
Sbjct: 124 YSFE-RYPQSILIGHAMKVLTVDGLSDCLSKCALSQRSYDF 163
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +3
Query: 90 SGMATNGDVYKKCYNGTCIVGVNKKVKGSIAKKAEAYLQAANKPHRHTVAKTKGAR 257
+G T+ + C G +V N K + + + + + +N P +H V + G+R
Sbjct: 124 NGFVTDNGYKQTCSTGQPVVAHNYKDRRATCPEVWLFQETSNVPMQHVVLRVYGSR 179
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -1
Query: 145 MHVPL*HFLY----TSPFVAIPLILICA*YSNVICNIK 44
+H P+ HF Y T + IPL+++ Y NVI ++K
Sbjct: 172 IHPPIYHFAYQVYMTVVLLVIPLVVMAGLYGNVITSLK 209
>Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical
protein Y69H2.8 protein.
Length = 348
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 446 LEHLNSWQGKLNPRGERFLTK*EIPSDYRVGFL 348
+EH NSW K N E F K I S++ +GF+
Sbjct: 160 IEHANSWALKFN-FYENFTEKTSILSEFAIGFM 191
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = -2
Query: 621 SPESPARRYRAVSQSPPDGERIVSFPNTSSVVVS*WKALSSPQHRATCIKTYRTGGSVSR 442
S + ++ SQSPP+ + S + S ++ K L Q+ A ++ +G +R
Sbjct: 564 SSSNADQKKEKTSQSPPESNQETSDAHNQSDAMNQLKKLHMQQNYANMVQAMNSGVGWAR 623
Query: 441 TFEQLAGQVESPWREISHQVR 379
+ GQ + P +++ V+
Sbjct: 624 GNGVVNGQQQHPQQQLPPNVQ 644
>AF024494-4|AAQ62459.1| 253|Caenorhabditis elegans Hypothetical
protein C38C3.4b protein.
Length = 253
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 366 IRWYFSLGEKSLATGIQLALPAVQMFETPIHQ 461
+R+ F G SL+TG++LAL A+Q ++ +HQ
Sbjct: 122 LRFLFEDGRFSLSTGLRLALFAIQPIQS-LHQ 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,795,083
Number of Sequences: 27780
Number of extensions: 364676
Number of successful extensions: 998
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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