Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_J04
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048287-1|AAH48287.1| 760|Homo sapiens SEC63 homolog (S. cerev... 74 3e-13
BC047221-1|AAH47221.1| 760|Homo sapiens SEC63 homolog (S. cerev... 74 3e-13
AL024507-3|CAI19745.1| 760|Homo sapiens SEC63 homolog (S. cerev... 74 3e-13
AJ011779-1|CAB46275.1| 760|Homo sapiens SEC63 protein protein. 74 3e-13
AF100141-1|AAC83375.1| 760|Homo sapiens SEC63 protein. 74 3e-13
Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD p... 40 0.004
BC131784-1|AAI31785.1| 595|Homo sapiens ASCC3L1 protein protein. 40 0.004
BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein. 40 0.004
BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein. 40 0.004
BC001417-1|AAH01417.4| 494|Homo sapiens ASCC3L1 protein protein. 40 0.004
AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specif... 40 0.004
AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens ... 40 0.004
AF085356-1|AAD40191.1| 595|Homo sapiens putative RNA helicase p... 40 0.004
AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein. 40 0.004
BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein. 35 0.15
Z86062-1|CAI19454.1| 2193|Homo sapiens RP1-121G13.4 protein. 32 0.81
AY013288-1|AAG45474.1| 1917|Homo sapiens ASC-1 complex subunit P... 32 0.81
AL591585-1|CAH73862.1| 2193|Homo sapiens RP1-121G13.4 protein. 32 0.81
AL356122-1|CAI16190.1| 2193|Homo sapiens RP1-121G13.4 protein. 32 0.81
AL133338-2|CAI21439.1| 2193|Homo sapiens RP1-121G13.4 protein. 32 0.81
AL121965-1|CAI19627.1| 2193|Homo sapiens RP1-121G13.4 protein. 32 0.81
AJ223948-1|CAA11679.1| 1257|Homo sapiens RNA helicase protein. 32 0.81
BC039593-1|AAH39593.1| 913|Homo sapiens ubiquitin specific pept... 31 1.4
AY074877-1|AAL79676.1| 913|Homo sapiens pVHL-interacting deubiq... 31 1.4
AL158207-6|CAC88170.1| 914|Homo sapiens ubiquitin specific pept... 31 1.4
AB023220-1|BAA76847.2| 917|Homo sapiens KIAA1003 protein protein. 31 1.4
AF108461-1|AAF31756.1| 1134|Homo sapiens ubinuclein protein. 29 5.7
AF108460-1|AAF31755.1| 1134|Homo sapiens ubinuclein protein. 29 5.7
AF108459-1|AAF34869.1| 1134|Homo sapiens ubinuclein protein. 29 5.7
U18269-1|AAB60434.1| 237|Homo sapiens thymopoietin beta protein. 29 7.6
U09088-1|AAB60331.1| 345|Homo sapiens thymopoietin gamma protein. 29 7.6
U09087-1|AAB60330.1| 454|Homo sapiens thymopoietin beta protein. 29 7.6
EF028063-1|ABL61272.1| 248|Homo sapiens thymopoietin zeta isofo... 29 7.6
BC053675-1|AAH53675.1| 454|Homo sapiens thymopoietin protein. 29 7.6
AF070631-1|AAC25390.1| 345|Homo sapiens thymopoietin gamma prot... 29 7.6
AB209297-1|BAD92534.1| 378|Homo sapiens Lamina-associated polyp... 29 7.6
>BC048287-1|AAH48287.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae) protein.
Length = 760
Score = 73.7 bits (173), Expect = 3e-13
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 98 ASEDESRDKSSAVEXXXXXQWDKFQKRLQKRER--LEGRSKSSHPVHCPYFPQEKQEYWW 271
+ D R++ +W + Q+ +Q++ER LE +SK +HPV+ YFP+EKQE+WW
Sbjct: 593 SDRDSDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWW 652
Query: 272 CYICDRKSHTLLT 310
YI DRK TL++
Sbjct: 653 LYIADRKEQTLIS 665
Score = 42.3 bits (95), Expect = 8e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 333 LVDAHELQLRFTAPRWPGLYTLACCLRSDSYIGMDQ 440
L D E++L+F AP PG Y LRSDSY+G+DQ
Sbjct: 673 LKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQ 708
>BC047221-1|AAH47221.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae) protein.
Length = 760
Score = 73.7 bits (173), Expect = 3e-13
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 98 ASEDESRDKSSAVEXXXXXQWDKFQKRLQKRER--LEGRSKSSHPVHCPYFPQEKQEYWW 271
+ D R++ +W + Q+ +Q++ER LE +SK +HPV+ YFP+EKQE+WW
Sbjct: 593 SDRDSDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWW 652
Query: 272 CYICDRKSHTLLT 310
YI DRK TL++
Sbjct: 653 LYIADRKEQTLIS 665
Score = 42.3 bits (95), Expect = 8e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 333 LVDAHELQLRFTAPRWPGLYTLACCLRSDSYIGMDQ 440
L D E++L+F AP PG Y LRSDSY+G+DQ
Sbjct: 673 LKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQ 708
>AL024507-3|CAI19745.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae protein.
Length = 760
Score = 73.7 bits (173), Expect = 3e-13
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 98 ASEDESRDKSSAVEXXXXXQWDKFQKRLQKRER--LEGRSKSSHPVHCPYFPQEKQEYWW 271
+ D R++ +W + Q+ +Q++ER LE +SK +HPV+ YFP+EKQE+WW
Sbjct: 593 SDRDSDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWW 652
Query: 272 CYICDRKSHTLLT 310
YI DRK TL++
Sbjct: 653 LYIADRKEQTLIS 665
Score = 42.3 bits (95), Expect = 8e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 333 LVDAHELQLRFTAPRWPGLYTLACCLRSDSYIGMDQ 440
L D E++L+F AP PG Y LRSDSY+G+DQ
Sbjct: 673 LKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQ 708
>AJ011779-1|CAB46275.1| 760|Homo sapiens SEC63 protein protein.
Length = 760
Score = 73.7 bits (173), Expect = 3e-13
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 98 ASEDESRDKSSAVEXXXXXQWDKFQKRLQKRER--LEGRSKSSHPVHCPYFPQEKQEYWW 271
+ D R++ +W + Q+ +Q++ER LE +SK +HPV+ YFP+EKQE+WW
Sbjct: 593 SDRDSDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWW 652
Query: 272 CYICDRKSHTLLT 310
YI DRK TL++
Sbjct: 653 LYIADRKEQTLIS 665
Score = 42.3 bits (95), Expect = 8e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 333 LVDAHELQLRFTAPRWPGLYTLACCLRSDSYIGMDQ 440
L D E++L+F AP PG Y LRSDSY+G+DQ
Sbjct: 673 LKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQ 708
>AF100141-1|AAC83375.1| 760|Homo sapiens SEC63 protein.
Length = 760
Score = 73.7 bits (173), Expect = 3e-13
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 98 ASEDESRDKSSAVEXXXXXQWDKFQKRLQKRER--LEGRSKSSHPVHCPYFPQEKQEYWW 271
+ D R++ +W + Q+ +Q++ER LE +SK +HPV+ YFP+EKQE+WW
Sbjct: 593 SDRDSDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWW 652
Query: 272 CYICDRKSHTLLT 310
YI DRK TL++
Sbjct: 653 LYIADRKEQTLIS 665
Score = 42.3 bits (95), Expect = 8e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 333 LVDAHELQLRFTAPRWPGLYTLACCLRSDSYIGMDQ 440
L D E++L+F AP PG Y LRSDSY+G+DQ
Sbjct: 673 LKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQ 708
>Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD
protein protein.
Length = 1701
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 1605 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 1643
>BC131784-1|AAI31785.1| 595|Homo sapiens ASCC3L1 protein protein.
Length = 595
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 499 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 537
>BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein.
Length = 1887
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 1791 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 1829
>BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein.
Length = 1308
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 1212 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 1250
>BC001417-1|AAH01417.4| 494|Homo sapiens ASCC3L1 protein protein.
Length = 494
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 398 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 436
>AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specific
spliceosomal protein protein.
Length = 2136
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 2040 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 2078
>AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens cDNA
FLJ14329 fis, clone PLACE4000259, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 1811
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 1715 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 1753
>AF085356-1|AAD40191.1| 595|Homo sapiens putative RNA helicase
protein.
Length = 595
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 499 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 537
>AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein.
Length = 2026
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E WW I D KS++L++
Sbjct: 1930 QLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLIS 1968
>BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein.
Length = 1821
Score = 34.7 bits (76), Expect = 0.15
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 194 RLEGRSKSSHPVHCPYFPQEKQEYWWCYICDRKSHTLLT 310
+LE + + PV P FPQ+++E W I D KS++L++
Sbjct: 1725 QLEREEEVTGPVIAPLFPQKREEGWLVVIGDAKSNSLIS 1763
>Z86062-1|CAI19454.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 2131 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 2163
>AY013288-1|AAG45474.1| 1917|Homo sapiens ASC-1 complex subunit P200
protein.
Length = 1917
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 1864 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 1896
>AL591585-1|CAH73862.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 2131 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 2163
>AL356122-1|CAI16190.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 2131 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 2163
>AL133338-2|CAI21439.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 2131 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 2163
>AL121965-1|CAI19627.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 2131 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 2163
>AJ223948-1|CAA11679.1| 1257|Homo sapiens RNA helicase protein.
Length = 1257
Score = 32.3 bits (70), Expect = 0.81
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 345 HELQLRFTAPRWPGLYTLACCLRSDSYIGMDQQ 443
H L F P PG Y SD Y+G+DQQ
Sbjct: 1204 HVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQ 1236
>BC039593-1|AAH39593.1| 913|Homo sapiens ubiquitin specific
peptidase 20 protein.
Length = 913
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTST 261
Q + AG RR+E + + V + + DG+ C TCDR+ T T
Sbjct: 426 QVLSAGSRRRKEQRYRSV-ISDIFDGSILSLVQCLTCDRVSTTVET 470
>AY074877-1|AAL79676.1| 913|Homo sapiens pVHL-interacting
deubiquitinating enzyme 2 protein.
Length = 913
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTST 261
Q + AG RR+E + + V + + DG+ C TCDR+ T T
Sbjct: 426 QVLSAGSRRRKEQRYRSV-ISDIFDGSILSLVQCLTCDRVSTTVET 470
>AL158207-6|CAC88170.1| 914|Homo sapiens ubiquitin specific
peptidase 20 protein.
Length = 914
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTST 261
Q + AG RR+E + + V + + DG+ C TCDR+ T T
Sbjct: 427 QVLSAGSRRRKEQRYRSV-ISDIFDGSILSLVQCLTCDRVSTTVET 471
>AB023220-1|BAA76847.2| 917|Homo sapiens KIAA1003 protein protein.
Length = 917
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTST 261
Q + AG RR+E + + V + + DG+ C TCDR+ T T
Sbjct: 430 QVLSAGSRRRKEQRYRSV-ISDIFDGSILSLVQCLTCDRVSTTVET 474
>AF108461-1|AAF31756.1| 1134|Homo sapiens ubinuclein protein.
Length = 1134
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTSTLASPAGN 240
QG KA P + + LQLV+ +G G PSA + +++S+ +PA +
Sbjct: 828 QGPKASPTQCHRSLLQLVKTAAKGQGFH-PSAPATSGGLSASSSSSHKTPASS 879
>AF108460-1|AAF31755.1| 1134|Homo sapiens ubinuclein protein.
Length = 1134
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTSTLASPAGN 240
QG KA P + + LQLV+ +G G PSA + +++S+ +PA +
Sbjct: 828 QGPKASPTQCHRSLLQLVKTAAKGQGFH-PSAPATSGGLSASSSSSHKTPASS 879
>AF108459-1|AAF34869.1| 1134|Homo sapiens ubinuclein protein.
Length = 1134
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 398 QGVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTSTLASPAGN 240
QG KA P + + LQLV+ +G G PSA + +++S+ +PA +
Sbjct: 828 QGPKASPTQCHRSLLQLVKTAAKGQGFH-PSAPATSGGLSASSSSSHKTPASS 879
>U18269-1|AAB60434.1| 237|Homo sapiens thymopoietin beta protein.
Length = 237
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 158 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 208
>U09088-1|AAB60331.1| 345|Homo sapiens thymopoietin gamma protein.
Length = 345
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 158 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 208
>U09087-1|AAB60330.1| 454|Homo sapiens thymopoietin beta protein.
Length = 454
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 158 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 208
>EF028063-1|ABL61272.1| 248|Homo sapiens thymopoietin zeta isoform
protein.
Length = 248
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 158 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 208
>BC053675-1|AAH53675.1| 454|Homo sapiens thymopoietin protein.
Length = 454
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 158 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 208
>AF070631-1|AAC25390.1| 345|Homo sapiens thymopoietin gamma
protein.
Length = 345
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 158 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 208
>AB209297-1|BAD92534.1| 378|Homo sapiens Lamina-associated
polypeptide 2, isoforms beta/gamma variant protein.
Length = 378
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 68 SSDELVSHSSASEDESRDKSSAVEXXXXXQWD-KFQKRLQKRERLEGRSKS 217
SS L + SS++E+ ++ S+ + + D K + +L+KRE L+GR+K+
Sbjct: 191 SSTPLPTISSSAENTRQNGSNDSDRYSDNEEDSKIELKLEKREPLKGRAKT 241
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,179,053
Number of Sequences: 237096
Number of extensions: 711847
Number of successful extensions: 4031
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4026
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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