Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_J04
         (456 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   2.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   2.7  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   6.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.4  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 209 SKSSHPVHCPYFPQEKQEYWWCYICDR 289
           SK+S   H      E+QE + C IC+R
Sbjct: 17  SKASLKRHVADKHAERQEEYRCVICER 43


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 300 VCDLRSHM*HHQYSCFSCGK*GQCT 226
           V  +R+H     Y C +CGK   C+
Sbjct: 192 VIHMRTHTGEKPYVCKACGKGFTCS 216


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 224 PVHCPYFPQEKQEYW 268
           P++C  FP    E W
Sbjct: 368 PIYCGNFPPRSMEPW 382


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = -2

Query: 395 GVKAGPARRREAQLQLVRVDERGDGARAPSAACATCDRICNTTST 261
           G   G A    A L + R+     G   P   C TCD    T ST
Sbjct: 340 GTSQGSAGLPSAILAM-RLSHPLHGNLLPPGVCYTCDVCGKTLST 383



 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 359 QLQLVRVDERGDGARAPSAACATCDRICNTTSTL 258
           +L L R  E+       SA CA C ++  T ++L
Sbjct: 384 KLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSL 417


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 233 CPYFPQEKQEYWWCYI 280
           C  F ++  +YW C I
Sbjct: 520 CDEFVEDSDDYWNCVI 535


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 155  QWDKFQKRLQKRERLEGRS 211
            +W +F+ R    E L GR+
Sbjct: 1139 EWSRFEFRAALHEALRGRT 1157


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -1

Query: 273 HHQYSCFSCG 244
           H +Y+C  CG
Sbjct: 480 HDEYTCMDCG 489


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 390 YTLACCLRSDSYIGMDQQA 446
           Y +AC L  D+YI   Q A
Sbjct: 542 YCVACGLHRDTYIHAQQIA 560


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,461
Number of Sequences: 438
Number of extensions: 1417
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)