Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_I24
(605 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 30 0.23
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 29 0.40
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 28 1.2
SPAC17A2.02c |||DUF887 family protein|Schizosaccharomyces pombe|... 28 1.2
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 1.6
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 27 2.1
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 26 4.9
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 6.5
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 25 8.6
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 8.6
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 30.3 bits (65), Expect = 0.23
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 531 PSKPYAISAHKPKNPTAYPTLSPITVANIEHTI--YASDIITQK 406
PSK YAI + P N T YP L + V + + Y + IT K
Sbjct: 194 PSKVYAIGSEIPVNITLYPLLKGLDVGKVTLVLKEYCTLFITSK 237
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 395 YELFFCVIMSLAYIVCSIFATVIGESVGYAVGFFGLCALIAYGFDGYLKYKAWKRGLPPQ 574
Y L C+I+ + +T++ S+ + F G+ A + Y F L++ W R L P
Sbjct: 514 YILLACLILFFMTLFSRSSSTILPPSILLILTFLGIVASLYYCFAHGLQFINWPRLLLPS 573
Query: 575 *PRSSI 592
RS +
Sbjct: 574 FLRSDM 579
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 460 NCRKYRAHNIRERHYHAKEQFVFVPGPAVVLLDQVERVREKQEQCDDI 317
N R+ R + +RE +K + P + LD+ R+R K++ D +
Sbjct: 132 NLRRQRENRLREEQEQSKRRKQETPSSKISELDRSIRIRWKRKYADQV 179
>SPAC17A2.02c |||DUF887 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 290
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 146 EVTPPQKVVRFDKDYFSKLPGILQLVQLMCNIIGFICIKVSWSFVSA 286
E++ P + + D ++ Q++ I+ FIC++++W + SA
Sbjct: 176 ELSTPFLNIHYFLDKTNRTGSKFQMINGFILIVTFICVRIAWGWFSA 222
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 311 FGNIITLFLFLSYTFHLVEKYDRWPWNKYELFFCV--IMSLAYIVCSIFAT 457
F + F F + +Y RW +NK++ V +S +I+ S F+T
Sbjct: 4 FLEVFVYFYFFPLLVFITLQYPRWTFNKWKALLPVSAYISFYFIIISSFST 54
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 305 YWFGNIITLFLFLSYT---FHLVEKYDRWPWNKYEL-FFCVIMSLAYIVCSIFATVIGES 472
+ FG ++T + +S F L + W W + FC I + V F + S
Sbjct: 526 FCFGILVTTCIMVSIITVYFQLCSENYNWWWRSFITPGFCGIYVFIFSVFYWFFKISSSS 585
Query: 473 VGYAVGFFGLCALIA 517
+ AV +FG LI+
Sbjct: 586 LATAVLYFGYSLLIS 600
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 471 LSPITVANIEHTIYASDIITQKNSSY 394
++P ++ + EH + SDI+T+ NS+Y
Sbjct: 497 VAPESLQDSEHLPHISDIVTRINSAY 522
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 275 FVSAIFYNILYWFGNIITL 331
FVS + +NIL W N+I L
Sbjct: 113 FVSQVAHNILVWLENLIPL 131
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 471 LSPI-TVANIEHTIYASDIITQKNSSYLFQGQRSYFSTKWNVYERNRNSVMIL 316
+SPI +V + + +Y SDII K +G S F N N + L
Sbjct: 562 VSPIKSVERVTNNVYISDIIGNKLKFVQKEGSNSLFLYTAGAESINENDTVFL 614
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 531 PSKPYAISAHKPKNPTAYPTLSPITVANIEHTI 433
P+K YAI ++ P + P L +T+ I T+
Sbjct: 191 PTKAYAIGSYIPIHFVLVPLLKRLTIGKISITL 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,736,158
Number of Sequences: 5004
Number of extensions: 60718
Number of successful extensions: 222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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