Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_I24
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97013-2|AAV58868.1| 190|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U97013-1|AAB52340.2| 270|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U97017-4|AAB52358.1| 156|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z75712-7|CAB00046.1| 208|Caenorhabditis elegans Hypothetical pr... 29 1.9
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29117-11|CAA82382.1| 307|Caenorhabditis elegans Hypothetical p... 28 4.5
Z79694-4|CAB01963.1| 398|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL022274-2|CAA18358.1| 329|Caenorhabditis elegans Hypothetical ... 28 5.9
AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical ... 28 5.9
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 27 7.9
U53338-4|AAA96192.3| 235|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF317421-1|AAK69599.1| 235|Caenorhabditis elegans lysosomal-ass... 27 7.9
AF067942-13|AAG45577.2| 386|Caenorhabditis elegans Hypothetical... 27 7.9
AF067942-12|AAT68887.1| 385|Caenorhabditis elegans Hypothetical... 27 7.9
>U97013-2|AAV58868.1| 190|Caenorhabditis elegans Hypothetical
protein F28H1.4b protein.
Length = 190
Score = 57.6 bits (133), Expect = 6e-09
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Frame = +2
Query: 173 RFDKDYFSKLPGILQLVQLMCNIIGFICIKVSWSFVSAIFY-NILYWFGNIITLFLFLSY 349
R D +Y L GI+++V ++ ++ FI + + ++ + + + + G +T L Y
Sbjct: 33 RLDCEYIRTLGGIMKIVCIVLCLLTFIFVMMGPAYYTGVGWATFVSSVGIFVTTSLLTLY 92
Query: 350 TFHLVEKYDRWPWNKYELFFC----VIMSLAYIVCSIFATVIGESVGYAVG-FFGLCALI 514
F +V+ W E+ +C V +A V ++ ++ + +A+ FF A+
Sbjct: 93 LFRVVDTLPSINWIVCEMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAFFAFGAMC 152
Query: 515 AYGFDGYLKYKAWK 556
AYGFD YLK+ +WK
Sbjct: 153 AYGFDCYLKFLSWK 166
>U97013-1|AAB52340.2| 270|Caenorhabditis elegans Hypothetical
protein F28H1.4a protein.
Length = 270
Score = 57.6 bits (133), Expect = 6e-09
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Frame = +2
Query: 173 RFDKDYFSKLPGILQLVQLMCNIIGFICIKVSWSFVSAIFY-NILYWFGNIITLFLFLSY 349
R D +Y L GI+++V ++ ++ FI + + ++ + + + + G +T L Y
Sbjct: 113 RLDCEYIRTLGGIMKIVCIVLCLLTFIFVMMGPAYYTGVGWATFVSSVGIFVTTSLLTLY 172
Query: 350 TFHLVEKYDRWPWNKYELFFC----VIMSLAYIVCSIFATVIGESVGYAVG-FFGLCALI 514
F +V+ W E+ +C V +A V ++ ++ + +A+ FF A+
Sbjct: 173 LFRVVDTLPSINWIVCEMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAFFAFGAMC 232
Query: 515 AYGFDGYLKYKAWK 556
AYGFD YLK+ +WK
Sbjct: 233 AYGFDCYLKFLSWK 246
>U97017-4|AAB52358.1| 156|Caenorhabditis elegans Hypothetical
protein F47B3.3 protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 398 ELFFC----VIMSLAYIVCSIFATVIGESVGYAVG-FFGLCALIAYGFDGYLKYKAWK 556
E+ +C V +A V ++ ++ + +A+ FF A+ AYGFD YLK+ +WK
Sbjct: 75 EMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAFFAFGAMCAYGFDCYLKFLSWK 132
>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
W09D10.2 protein.
Length = 1335
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 296 NILYW-FGNIITLFLFLSYTFHLVEKYDRWPWNKYELFFCVIMSLAYIVCSI 448
N+ W FG+++ L + TFHL W W + F + L + +C++
Sbjct: 1171 NVDMWTFGHLLVTQLIIVNTFHLALFVQYWTWPMFWSMFLSV--LLFFICAL 1220
>Z75712-7|CAB00046.1| 208|Caenorhabditis elegans Hypothetical
protein K04G2.9 protein.
Length = 208
Score = 29.5 bits (63), Expect = 1.9
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Frame = +2
Query: 179 DKDYFSKLPGILQLVQLMCNIIGFICIKVSWSFVSAIFYNILYWFGNIITL--------F 334
DK+Y G+L++ ++ ++ +C+ S F F IL+ ++T+ F
Sbjct: 41 DKNYCLGPLGLLRIAEIFLCVV-IVCLITS-VFGPGPFKGILFGQTILLTVASVAMLLTF 98
Query: 335 LFL-SYTFHL-VEKYDRWPWNKYELFFCVIMSLAYIVCSI 448
+FL +Y F L + D + W + +L F VI ++ +IV SI
Sbjct: 99 IFLIAYFFTLHLSHLDFFCWREADLLFNVICAVLFIVLSI 138
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein
C16A3.7 protein.
Length = 1119
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 388 PGPAVVLLDQVERVREKQEQCDDIAKPIQ 302
PGPAV+ D +++ K+E+ + + KP++
Sbjct: 960 PGPAVIRKDIMDQALSKKEETEGLMKPLR 988
>Z29117-11|CAA82382.1| 307|Caenorhabditis elegans Hypothetical
protein C48B4.11 protein.
Length = 307
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +2
Query: 407 FCVIMSLAYIVCSIFATVI---GESVGYAVGFFGLCALIAYGF 526
F +IM++ Y+ + + +I G+++ ++V FF LC L+AY +
Sbjct: 193 FELIMTVTYVFNNSWIMMIHFVGQAIVFSVIFFLLCCLLAYEY 235
>Z79694-4|CAB01963.1| 398|Caenorhabditis elegans Hypothetical
protein C15A11.4 protein.
Length = 398
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 200 LPGILQLVQLMCNIIGFICIKVSWSFVSAIFYNILYWFG 316
+ G++ +++L ++IGF+ SW +SA IL FG
Sbjct: 330 IAGLIYVLEL-ASLIGFLLTNPSWGLISAAVTIILCGFG 367
>AL022274-2|CAA18358.1| 329|Caenorhabditis elegans Hypothetical
protein H24D24.2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 47 IRIGVSVCCPKLNRW*IKHEMYNIYQNNL-APPPEVT 154
IRI + VC P + W + +M IY+ N+ PP T
Sbjct: 157 IRIFLIVCLPHIPFWVVDFKMDEIYEYNVWVSPPSCT 193
>AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical
protein Y73C8C.2 protein.
Length = 342
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 79 FWTTYRYTNSNTGVNCS 29
FW TY +T +N GV CS
Sbjct: 323 FWVTYTHTAANEGVVCS 339
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 79 FWTTYRYTNSNTGVNCSNSPKT 14
FW +Y +T N GV CS + K+
Sbjct: 334 FWVSYTHTAPNEGVVCSKNRKS 355
>U53338-4|AAA96192.3| 235|Caenorhabditis elegans Hypothetical
protein C05E11.3 protein.
Length = 235
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +2
Query: 209 ILQLVQLMCNIIGFICIKVSWSFVSAIFYNIL 304
++Q++ ++C I+ +C ++ SA+FY ++
Sbjct: 129 VMQVIAILCFIVVLVCGTIALCTDSAVFYRLI 160
>AF317421-1|AAK69599.1| 235|Caenorhabditis elegans
lysosomal-associated transmembraneprotein protein.
Length = 235
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +2
Query: 209 ILQLVQLMCNIIGFICIKVSWSFVSAIFYNIL 304
++Q++ ++C I+ +C ++ SA+FY ++
Sbjct: 129 VMQVIAILCFIVVLVCGTIALCTDSAVFYRLI 160
>AF067942-13|AAG45577.2| 386|Caenorhabditis elegans Hypothetical
protein ZK6.11a protein.
Length = 386
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 380 SGRTSRPSGTCTRETGTV 327
SG TSRP T TR +GTV
Sbjct: 355 SGTTSRPGQTTTRSSGTV 372
>AF067942-12|AAT68887.1| 385|Caenorhabditis elegans Hypothetical
protein ZK6.11b protein.
Length = 385
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 380 SGRTSRPSGTCTRETGTV 327
SG TSRP T TR +GTV
Sbjct: 354 SGTTSRPGQTTTRSSGTV 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,347,224
Number of Sequences: 27780
Number of extensions: 351471
Number of successful extensions: 1174
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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