Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I19
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359253-1|CAH73742.1|  690|Homo sapiens proprotein convertase s...    31   2.3  
AL353607-1|CAI41232.1|  690|Homo sapiens proprotein convertase s...    31   2.3  

>AL359253-1|CAH73742.1|  690|Homo sapiens proprotein convertase
           subtilisin/kexin type 5 protein.
          Length = 690

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 176 NIIKWHDMAWHGAAWRGVAW 117
           N +KW+ M W+G  W G+ W
Sbjct: 662 NGMKWNGMKWNGMEWNGMEW 681



 Score = 29.9 bits (64), Expect = 5.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 176 NIIKWHDMAWHGAAWRGVAW 117
           N ++W+ M W+G  W G+ W
Sbjct: 657 NRMEWNGMKWNGMKWNGMEW 676


>AL353607-1|CAI41232.1|  690|Homo sapiens proprotein convertase
           subtilisin/kexin type 5 protein.
          Length = 690

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 176 NIIKWHDMAWHGAAWRGVAW 117
           N +KW+ M W+G  W G+ W
Sbjct: 662 NGMKWNGMKWNGMEWNGMEW 681



 Score = 29.9 bits (64), Expect = 5.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 176 NIIKWHDMAWHGAAWRGVAW 117
           N ++W+ M W+G  W G+ W
Sbjct: 657 NRMEWNGMKWNGMKWNGMEW 676


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,832,732
Number of Sequences: 237096
Number of extensions: 1216302
Number of successful extensions: 5420
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5409
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)