Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I18
         (524 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated prot...    34   0.35 
AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated prot...    34   0.35 
BC117287-1|AAI17288.1|  174|Homo sapiens keratin associated prot...    33   0.46 
BC069560-1|AAH69560.1|  173|Homo sapiens KRTAP9-2 protein protein.     33   0.46 
AB076364-1|BAD01551.1|  245|Homo sapiens keratin associated prot...    32   1.4  
BC121010-1|AAI21011.1|  571|Homo sapiens kelch-like 28 (Drosophi...    31   1.9  
BC121009-1|AAI21010.1|  571|Homo sapiens kelch-like 28 (Drosophi...    31   1.9  
BC074919-1|AAH74919.1|  159|Homo sapiens keratin associated prot...    31   2.5  
BC074918-1|AAH74918.1|  159|Homo sapiens keratin associated prot...    31   2.5  
AJ406947-1|CAC27586.1|  159|Homo sapiens keratin associated prot...    31   2.5  
BC074982-1|AAH74982.1|  159|Homo sapiens keratin associated prot...    30   5.7  
BC074981-1|AAH74981.1|  159|Homo sapiens keratin associated prot...    30   5.7  
AJ406950-1|CAC27589.1|  159|Homo sapiens keratin associated prot...    30   5.7  
AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family...    29   7.6  
AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant...    29   7.6  
AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen C...    29   7.6  
AK093453-1|BAC04171.1|  339|Homo sapiens protein ( Homo sapiens ...    29   10.0 

>BC110619-1|AAI10620.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 33.9 bits (74), Expect = 0.35
 Identities = 20/76 (26%), Positives = 28/76 (36%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S + C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 19  CRTTCWKPTTVTTCSSTSCCQPACCVS-SCCQPCCRPTSCQNTCCRTTCCQPTCVTSCCQ 77

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 78  PSCCSTPCCQPTCCGS 93


>AJ406946-1|CAC27585.1|  174|Homo sapiens keratin associated protein
           9.2 protein.
          Length = 174

 Score = 33.9 bits (74), Expect = 0.35
 Identities = 20/76 (26%), Positives = 28/76 (36%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S + C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 19  CRTTCWKPTTVTTCSSTSCCQPACCVS-SCCQPCCRPTSCQNTCCRTTCCQPTCVTSCCQ 77

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 78  PSCCSTPCCQPTCCGS 93


>BC117287-1|AAI17288.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 33.5 bits (73), Expect = 0.46
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 19  CRTTCWKPTTVTTCSSTPCCQPACCVS-SCCQPCCRPTCCQNTCCRTTCCQPTCVTSCCQ 77

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 78  PSCCSTPCCQPTCCGS 93


>BC069560-1|AAH69560.1|  173|Homo sapiens KRTAP9-2 protein protein.
          Length = 173

 Score = 33.5 bits (73), Expect = 0.46
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 18  CRTTCWKPTTVTTCSSTPCCQPACCVS-SCCQPCCRPTCCQNTCCRTTCCQPTCVTSCCQ 76

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 77  PSCCSTPCCQPTCCGS 92


>AB076364-1|BAD01551.1|  245|Homo sapiens keratin associated protein
           protein.
          Length = 245

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = -1

Query: 476 TVSCFIQINCDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLC---QNHCNSFV 306
           T SC  Q +C  A    TS  +    A C  VC   V C  V C+   C    + C    
Sbjct: 81  TPSCCQQSSCQPAC--CTS--SPCQQACCVPVCCKTVCCKPVCCMPVCCGPSSSCCQQSS 136

Query: 305 CLKHNAITSEVQQAFCPAIVFQMIC 231
           C     I+S  QQ+ C  +  + IC
Sbjct: 137 CQPACCISSPCQQSCCVPVCCKPIC 161


>BC121010-1|AAI21011.1|  571|Homo sapiens kelch-like 28 (Drosophila)
           protein.
          Length = 571

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 93  AGLMSLKGGYTGHIYLKSIQRRPVPPV-KWPSSTPLTT 203
           AG +   GGY G  YL+S+++  +P + KW    P+TT
Sbjct: 385 AGELYALGGYDGQSYLQSVEKY-IPKIRKWQPVAPMTT 421


>BC121009-1|AAI21010.1|  571|Homo sapiens kelch-like 28 (Drosophila)
           protein.
          Length = 571

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 93  AGLMSLKGGYTGHIYLKSIQRRPVPPV-KWPSSTPLTT 203
           AG +   GGY G  YL+S+++  +P + KW    P+TT
Sbjct: 385 AGELYALGGYDGQSYLQSVEKY-IPKIRKWQPVAPMTT 421


>BC074919-1|AAH74919.1|  159|Homo sapiens keratin associated protein
           9-3 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 14  CRTTCWQPTTVTTCSSTPCCQPSCCVS-SCCQPCCHPTCCQNTCCRTTCCQPICVTSCCQ 72

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 73  PSCCSTPCCQPTCCGS 88


>BC074918-1|AAH74918.1|  159|Homo sapiens keratin associated protein
           9-3 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 14  CRTTCWQPTTVTTCSSTPCCQPSCCVS-SCCQPCCHPTCCQNTCCRTTCCQPICVTSCCQ 72

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 73  PSCCSTPCCQPTCCGS 88


>AJ406947-1|CAC27586.1|  159|Homo sapiens keratin associated protein
           9.3 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C    C +   +TS  Q
Sbjct: 14  CRTTCWQPTTVTTCSSTPCCQPSCCVS-SCCQPCCHPTCCQNTCCRTTCCQPICVTSCCQ 72

Query: 269 QAFCPAIVFQMICIKS 222
            + C     Q  C  S
Sbjct: 73  PSCCSTPCCQPTCCGS 88


>BC074982-1|AAH74982.1|  159|Homo sapiens keratin associated protein
           9-8 protein.
          Length = 159

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 22/85 (25%), Positives = 30/85 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C   +C     +TS  Q
Sbjct: 14  CRTTCWKPTTVTTCSSTPCCQPSCCVS-SCCQPCCRPTCCQNTCCQPIC-----VTSCCQ 67

Query: 269 QAFCPAIVFQMICIKSRN*YDRCGQ 195
            + C     Q  C    +    CGQ
Sbjct: 68  PSCCSTPCCQPTCCGQTSCGSSCGQ 92


>BC074981-1|AAH74981.1|  159|Homo sapiens keratin associated protein
           9-8 protein.
          Length = 159

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 22/85 (25%), Positives = 30/85 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C   +C     +TS  Q
Sbjct: 14  CRTTCWKPTTVTTCSSTPCCQPSCCVS-SCCQPCCRPTCCQNTCCQPIC-----VTSCCQ 67

Query: 269 QAFCPAIVFQMICIKSRN*YDRCGQ 195
            + C     Q  C    +    CGQ
Sbjct: 68  PSCCSTPCCQPTCCGQTSCGSSCGQ 92


>AJ406950-1|CAC27589.1|  159|Homo sapiens keratin associated protein
           9.8 protein.
          Length = 159

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 22/85 (25%), Positives = 30/85 (35%)
 Frame = -1

Query: 449 CDVASFVATS*VNAFSVATCDCVCAVRVTCWRVWCLDFLCQNHCNSFVCLKHNAITSEVQ 270
           C    +  T+     S   C   C V  +C +  C    CQN C   +C     +TS  Q
Sbjct: 14  CRTTCWKPTTVTTCSSTPCCQPSCCVS-SCCQPCCRPTCCQNTCCQPIC-----VTSCCQ 67

Query: 269 QAFCPAIVFQMICIKSRN*YDRCGQ 195
            + C     Q  C    +    CGQ
Sbjct: 68  PSCCSTPCCQPTCCGQTSCGSSCGQ 92


>AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C,
           1 protein.
          Length = 1142

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +3

Query: 120 YTGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPGLYTYHLEDYSWTESLLNFTSDSIVL 299
           YT    L+S    P  P + P+ +PL +PV   P   +  L   S   S  + TS S+  
Sbjct: 785 YTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSK 844

Query: 300 QANET 314
            + E+
Sbjct: 845 SSPES 849


>AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated
           antigen protein.
          Length = 1142

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +3

Query: 120 YTGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPGLYTYHLEDYSWTESLLNFTSDSIVL 299
           YT    L+S    P  P + P+ +PL +PV   P   +  L   S   S  + TS S+  
Sbjct: 785 YTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSK 844

Query: 300 QANET 314
            + E+
Sbjct: 845 SSPES 849


>AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen CT7
           protein.
          Length = 1142

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +3

Query: 120 YTGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPGLYTYHLEDYSWTESLLNFTSDSIVL 299
           YT    L+S    P  P + P+ +PL +PV   P   +  L   S   S  + TS S+  
Sbjct: 785 YTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSK 844

Query: 300 QANET 314
            + E+
Sbjct: 845 SSPES 849


>AK093453-1|BAC04171.1|  339|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
           Homo sapiens germline specific RNA binding protein
           (DAZL1) mRNA. ).
          Length = 339

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +3

Query: 120 YTGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPGLY---TYHLEDYS------WTESLL 272
           + G  Y  + +   VPP  WPS +  ++PV++   +Y    YH +         W +SLL
Sbjct: 147 HNGVAYFHTPEVTSVPP-PWPSRSACSSPVMVAQPIYQQPAYHYQGIKQCHTRRWMDSLL 205

Query: 273 NFT 281
            FT
Sbjct: 206 PFT 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,210,661
Number of Sequences: 237096
Number of extensions: 1555606
Number of successful extensions: 7423
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7401
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)