SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I18
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071523-1|AAL49145.1|  483|Drosophila melanogaster RE57134p pro...    28   8.9  
AE014134-931|AAF52260.2|  483|Drosophila melanogaster CG14015-PA...    28   8.9  

>AY071523-1|AAL49145.1|  483|Drosophila melanogaster RE57134p
           protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 120 YTGHIYLKSIQRRPVPPVKWPSSTPLTTP 206
           YT  +     ++ P PP + P+  PLTTP
Sbjct: 134 YTAPVPWYKSKKPPPPPAEHPNDVPLTTP 162


>AE014134-931|AAF52260.2|  483|Drosophila melanogaster CG14015-PA
           protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 120 YTGHIYLKSIQRRPVPPVKWPSSTPLTTP 206
           YT  +     ++ P PP + P+  PLTTP
Sbjct: 134 YTAPVPWYKSKKPPPPPAEHPNDVPLTTP 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,294,041
Number of Sequences: 53049
Number of extensions: 481502
Number of successful extensions: 1529
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -