Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I18
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   2.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   2.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   5.8  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 269 QAFCPAIVFQMICIK 225
           Q FCP +V + +CIK
Sbjct: 51  QRFCPNVVPKPLCIK 65


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 269 QAFCPAIVFQMICIK 225
           Q FCP +V + +CIK
Sbjct: 51  QRFCPNVVPKPLCIK 65


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 21  YYRLV*IMVGGDPSYSTNSVSGSSAGLMS 107
           + RL       DP Y+T +++G S  L S
Sbjct: 221 FQRLTSSTFASDPRYTTFTINGESFTLQS 249


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +2

Query: 140 EINTTETSTSCEMA*FNAIDHTGRIN 217
           E    ++   C M  FN +D  G  N
Sbjct: 55  EDENVQSYVECMMKKFNVVDENGNFN 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,601
Number of Sequences: 438
Number of extensions: 3215
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)