Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I17
         (321 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023858-1|CAA19568.2|  328|Caenorhabditis elegans Hypothetical ...    27   4.0  
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...    26   5.3  
AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical ...    26   5.3  
AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical ...    26   5.3  
Z67755-2|CAA91755.2|  322|Caenorhabditis elegans Hypothetical pr...    25   9.2  

>AL023858-1|CAA19568.2|  328|Caenorhabditis elegans Hypothetical
           protein ZK285.1 protein.
          Length = 328

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 52  TKGYKPVDRQQ*VTFEYQNHLPCSLTRLPSVAIMGIPPFCLG 177
           ++  K +  Q   +  +Q  +PC L  LP+  I+ +P F +G
Sbjct: 237 SQALKSLQAQLFYSLIFQTAIPCVLMYLPAGIILSVPMFNVG 278


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 170 VWGDLYPTVDAFTVKWMDIIIVGVYQVTPL 259
           ++  L PT+D   +K  D++I  V++  PL
Sbjct: 416 IYNHLVPTIDYSAMKNADVVIEAVFEDLPL 445


>AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical
           protein F27B3.5 protein.
          Length = 787

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +2

Query: 47  RRLRDINQWIGNSR*PLSTKI 109
           ++L++IN+ + NSR  LSTK+
Sbjct: 519 KKLKEINEKVSNSRDQLSTKV 539


>AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical
           protein C09E7.7 protein.
          Length = 995

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +2

Query: 47  RRLRDINQWIGNSR*PLSTKI 109
           ++L++IN+ + NSR  LSTK+
Sbjct: 726 KKLKEINEKVSNSRDQLSTKV 746


>Z67755-2|CAA91755.2|  322|Caenorhabditis elegans Hypothetical
           protein F54F7.2 protein.
          Length = 322

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 203 FTVKWMDIIIVGVYQV 250
           FT +W+D I+ G+Y++
Sbjct: 96  FTREWIDTILTGIYEI 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,841,094
Number of Sequences: 27780
Number of extensions: 160463
Number of successful extensions: 354
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)