Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I17
         (321 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    26   0.097
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   2.1  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   2.8  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   2.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   2.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   4.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 26.2 bits (55), Expect = 0.097
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 131 VYQAWRLWEFPPFVWG-DLYPTVDAF 205
           VY+ WR W+FP  V   D +P+V  F
Sbjct: 858 VYEDWRHWKFPNLVEVLDEFPSVRPF 883


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 185 ISLPKQKGGIPIIAT 141
           I+LPK K GIP+  T
Sbjct: 201 ITLPKWKDGIPVTLT 215


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 136 PSVAIMGIPPFCLGRLISNSGCIYG 210
           P  AIMG+     G L  NSG  YG
Sbjct: 221 PVNAIMGLFVLWWGWLAFNSGSTYG 245


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 231 IIISIHLTVNASTVGYKSPQT 169
           + ISI +TV    V ++SPQT
Sbjct: 318 VSISICVTVVVLNVHFRSPQT 338


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 231 IIISIHLTVNASTVGYKSPQT 169
           + ISI +TV    V ++SPQT
Sbjct: 318 VSISICVTVVVLNVHFRSPQT 338


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +2

Query: 143 WRLWEFPPFVWGDL 184
           WR   + PF WG +
Sbjct: 553 WRFQPWGPFTWGGI 566


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 5/26 (19%), Positives = 15/26 (57%)
 Frame = +2

Query: 137 QAWRLWEFPPFVWGDLYPTVDAFTVK 214
           + + +W   P+V+G+ +  + +F  +
Sbjct: 110 EIYYIWSHFPYVFGEAFCIIQSFAAE 135


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 102 PKSPTMFANSSTKRGDYGNSPLL 170
           PK+  M  N   K  D+G+S L+
Sbjct: 183 PKNILMSKNGQPKLTDFGSSVLI 205


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,890
Number of Sequences: 438
Number of extensions: 1972
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)