Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I16
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   4.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   4.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.3  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 450 ALCVGVQSRYLIVSEPVYYIQHYEEP 527
           A+CVGV +  +I   PV Y+  YE P
Sbjct: 501 AICVGVFTFNIIKFVPVKYLT-YEYP 525


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 450 ALCVGVQSRYLIVSEPVYYIQHYEEP 527
           A+CVGV +  +I   PV Y+  YE P
Sbjct: 554 AICVGVFTFNIIKFVPVKYLT-YEYP 578


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 474 RYLIVSEPVYYIQH 515
           RY+ V++P+ Y +H
Sbjct: 284 RYIAVTQPIKYAKH 297


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 453 LCVGVQSRYLIVSEPVYYIQ 512
           LC     RYL V+ PV Y Q
Sbjct: 156 LCAISLDRYLAVTRPVSYPQ 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,696
Number of Sequences: 438
Number of extensions: 3001
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)