Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I12
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104485-1|AAI04486.1|  955|Homo sapiens calsyntenin 2 protein.        30   5.9  
BC103506-1|AAI03507.1|  955|Homo sapiens calsyntenin 2 protein.        30   5.9  
BC103496-1|AAI03497.1|  955|Homo sapiens calsyntenin 2 protein.        30   5.9  
AY753303-1|AAV30553.1|  955|Homo sapiens alcadein gamma protein.       30   5.9  
AJ278018-1|CAC14924.1|  955|Homo sapiens calsyntenin-2 protein.        30   5.9  

>BC104485-1|AAI04486.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 226 ELFVVQFEFKEFQPSEQSVRVSTDV*PTAKPEQELWTKQCAIQQG 360
           E+ V  ++  + +P+ Q   V  DV P  KP  + WTK+   Q G
Sbjct: 230 EILVTAYDCGQ-KPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPG 273


>BC103506-1|AAI03507.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 226 ELFVVQFEFKEFQPSEQSVRVSTDV*PTAKPEQELWTKQCAIQQG 360
           E+ V  ++  + +P+ Q   V  DV P  KP  + WTK+   Q G
Sbjct: 230 EILVTAYDCGQ-KPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPG 273


>BC103496-1|AAI03497.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 226 ELFVVQFEFKEFQPSEQSVRVSTDV*PTAKPEQELWTKQCAIQQG 360
           E+ V  ++  + +P+ Q   V  DV P  KP  + WTK+   Q G
Sbjct: 230 EILVTAYDCGQ-KPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPG 273


>AY753303-1|AAV30553.1|  955|Homo sapiens alcadein gamma protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 226 ELFVVQFEFKEFQPSEQSVRVSTDV*PTAKPEQELWTKQCAIQQG 360
           E+ V  ++  + +P+ Q   V  DV P  KP  + WTK+   Q G
Sbjct: 230 EILVTAYDCGQ-KPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPG 273


>AJ278018-1|CAC14924.1|  955|Homo sapiens calsyntenin-2 protein.
          Length = 955

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 226 ELFVVQFEFKEFQPSEQSVRVSTDV*PTAKPEQELWTKQCAIQQG 360
           E+ V  ++  + +P+ Q   V  DV P  KP  + WTK+   Q G
Sbjct: 230 EILVTAYDCGQ-KPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPG 273


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,585,228
Number of Sequences: 237096
Number of extensions: 1358130
Number of successful extensions: 2098
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)