Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_I09
(309 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0753 - 24177863-24178021,24178425-24178730,24181204-241814... 29 0.98
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 28 1.3
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 27 2.3
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575... 27 3.0
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179... 27 4.0
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315... 27 4.0
12_02_1282 + 27528159-27529148,27529549-27529614 26 5.2
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 26 5.2
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 26 5.2
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 26 5.2
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 26 5.2
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 26 5.2
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 26 5.2
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 26 5.2
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 26 5.2
12_02_0582 - 20789739-20790182,20794940-20796120,20796450-20796477 26 6.9
02_02_0335 + 9063749-9064216,9064846-9064890,9065351-9065470,906... 26 6.9
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 25 9.2
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 25 9.2
03_05_0030 - 19994777-19994789,19995072-19995451 25 9.2
02_01_0532 + 3863744-3863754,3864223-3864874 25 9.2
>06_03_0753 -
24177863-24178021,24178425-24178730,24181204-24181475,
24181663-24181696,24181937-24182014,24182373-24182516,
24183064-24183122,24183593-24183723,24186655-24186743
Length = 423
Score = 28.7 bits (61), Expect = 0.98
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 288 KIKCSEELMKRGRSRGHTASSTIWLPLSVR 199
++KCSE L+ S HT T+WL L R
Sbjct: 2 QLKCSERLVSLKASVLHTVDDTMWLKLHRR 31
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 49 TAGPGTASAPCTLLHIIRQD*NLMWEKYIFRDWASVTQAQTPGQRKA*IKPYRQGKP 219
T PG C LL +I + K+ A + QTP Q A I+ R GKP
Sbjct: 223 TLHPGVTVVVCPLLSLIEDQIVALNFKFAIPA-AFLNSQQTPSQSSAVIQELRSGKP 278
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 158 PRPKHRGNARHRSNRTDRGSHIVELAVCPRLR 253
P P+ + RH S R DRGS I + PR R
Sbjct: 319 PPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRR 350
>03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,
5753632-5753820,5753911-5754013,5754087-5754269,
5754392-5754484,5755031-5755219,5756133-5756327
Length = 1306
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 122 GRSTFSETGRV*PRPKHRGNARHRSN-RTDRGSH 220
G T+ +V + +H G+ HR N TD+G H
Sbjct: 1102 GTGTYLPNPKVPFKDRHSGSRNHRGNYNTDKGDH 1135
>11_06_0418 -
23317077-23317343,23317614-23317787,23317886-23317971,
23318125-23318244,23318338-23318368,23318457-23318532,
23318672-23318759,23318877-23318938,23319041-23319117,
23319890-23319992,23320237-23320298,23321116-23321289,
23322160-23322405
Length = 521
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 16 RLRCSWSSGRQTAGPGTASAP 78
+++CSW G + PGTASAP
Sbjct: 431 QIKCSW--GSKPTPPGTASAP 449
>01_01_0419 -
3146851-3147339,3148428-3148663,3148847-3149793,
3150258-3150356,3151128-3151501
Length = 714
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 167 WAWVTLAQSRKMYFSHIKF*SCLIICNNVQ 78
WAW T +Q + SH KF S I N ++
Sbjct: 532 WAWETWSQLVLLNISHNKFSSVTTIVNEIR 561
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 159 GVSHTVPIYEGYTLPHAILRL 179
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 160 GVSHTVPIYEGYALPHAILRL 180
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 165 GLGHTRPVSENVLLPHQILVL 103
G+ HT P+ E LPH IL L
Sbjct: 159 GVSHTVPIYEGFTLPHAILRL 179
>12_02_0582 - 20789739-20790182,20794940-20796120,20796450-20796477
Length = 550
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 105 RLKFDVGEVHFPRLGECDPGPNTGATQGIDQTVQTGEAILWN*LCARGCARV 260
RL D + R+G CD P +G + + EA+ W+ L C V
Sbjct: 304 RLHVDAPGLRLLRVGHCDNLPCSGDPAPVRVSAPRLEALAWDRLECIACREV 355
>02_02_0335 +
9063749-9064216,9064846-9064890,9065351-9065470,
9066025-9067527
Length = 711
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 184 CVAPVFGPGSHSPSLGKCTSPTSNFSLA*LYAITCKGRLRSPD 56
C A F PGS+ S+G + N +++ ++ KGR R D
Sbjct: 196 CTAQPFSPGSYRSSVG---DSSINQAISPARSLDIKGRFRGAD 235
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 19 LRCSWSSGRQTAGPGTASAPCTLLHI 96
LRCSW++ ++ A P A A + H+
Sbjct: 168 LRCSWTNPKRLAKPSLAIASLSHQHL 193
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 217 ASPVCTV*SMPCVAPVFGPGSHSPSLGKCTSP 122
ASPV PCV+PV P P C SP
Sbjct: 262 ASPVAAPSPAPCVSPVAAPSPAPP----CKSP 289
>03_05_0030 - 19994777-19994789,19995072-19995451
Length = 130
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 61 GTASAPCTLLHIIRQD*NLMWEKYIFRDWASVTQAQ 168
G A+ C+ +D L+W + RDWA +T A+
Sbjct: 34 GGATRACSAWRASARD-PLVWRRVDLRDWAVLTSAR 68
>02_01_0532 + 3863744-3863754,3864223-3864874
Length = 220
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 161 RPKHRGNARHRSNRTDR-GSHIVELA-VCPRLR 253
RP + NA+HRSNR R G +V + PR R
Sbjct: 176 RPSYFSNAQHRSNRGARTGPRLVARSPALPRAR 208
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,895,621
Number of Sequences: 37544
Number of extensions: 186706
Number of successful extensions: 454
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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