Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I09
         (309 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052614-1|AAH52614.1|  302|Homo sapiens C3orf32 protein protein.      29   2.1  
AB024705-1|BAA76932.1|  353|Homo sapiens fls485 protein.               29   2.1  
BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protei...    28   4.8  
AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protei...    28   4.8  
AC118060-1|AAX88975.1|  315|Homo sapiens unknown protein.              28   4.8  

>BC052614-1|AAH52614.1|  302|Homo sapiens C3orf32 protein protein.
          Length = 302

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 10  SGRLRCSWSSGRQTAGPGTASAPCTLLHIIRQD*NLMWEKYIF 138
           SGR RCS  SGR      T      LLH I+    +MW+  +F
Sbjct: 148 SGRRRCSTCSGRGNKTCATCKGEKKLLHFIQL--VIMWKNSLF 188


>AB024705-1|BAA76932.1|  353|Homo sapiens fls485 protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 10  SGRLRCSWSSGRQTAGPGTASAPCTLLHIIRQD*NLMWEKYIF 138
           SGR RCS  SGR      T      LLH I+    +MW+  +F
Sbjct: 199 SGRRRCSTCSGRGNKTCATCKGEKKLLHFIQL--VIMWKNSLF 239


>BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protein,
           130kDa protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 105 RLKFDVGEVHFPRLGECDPGPNTGATQGIDQTVQTGEAILWN 230
           RL+ ++    FPRLG     P+TG +Q   Q   +G A L N
Sbjct: 22  RLQVEMSSQQFPRLG----APSTGLSQAPSQIANSGSAGLIN 59


>AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protein
           130 protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 105 RLKFDVGEVHFPRLGECDPGPNTGATQGIDQTVQTGEAILWN 230
           RL+ ++    FPRLG     P+TG +Q   Q   +G A L N
Sbjct: 22  RLQVEMSSQQFPRLG----APSTGLSQAPSQIANSGSAGLIN 59


>AC118060-1|AAX88975.1|  315|Homo sapiens unknown protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 105 RLKFDVGEVHFPRLGECDPGPNTGATQGIDQTVQTGEAILWN 230
           RL+ ++    FPRLG     P+TG +Q   Q   +G A L N
Sbjct: 22  RLQVEMSSQQFPRLG----APSTGLSQAPSQIANSGSAGLIN 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,528,552
Number of Sequences: 237096
Number of extensions: 1090085
Number of successful extensions: 2994
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2994
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)