Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I09
         (309 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   0.84 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   0.84 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   0.84 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.9  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   3.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    20   5.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   5.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   7.8  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 66  RKRPLHVIAYN*ARLKFDVGEVHFPRLGECDPGPNTGATQGIDQTV 203
           RKRP+H + Y         GE   P   + + GP TGAT G ++ V
Sbjct: 389 RKRPMHNVVYR-------PGE--NPVTQKREGGPPTGATTGPNEIV 425


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 66  RKRPLHVIAYN*ARLKFDVGEVHFPRLGECDPGPNTGATQGIDQTV 203
           RKRP+H + Y         GE   P   + + GP TGAT G ++ V
Sbjct: 409 RKRPMHNVVYR-------PGE--NPVTQKREGGPPTGATTGPNEIV 445


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 66  RKRPLHVIAYN*ARLKFDVGEVHFPRLGECDPGPNTGATQGIDQTV 203
           RKRP+H + Y         GE   P   + + GP TGAT G ++ V
Sbjct: 358 RKRPMHNVVYR-------PGE--NPVTQKREGGPPTGATTGPNEIV 394


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 179 CPGVWAWVTLAQSRKMYFS 123
           C G+W W+ L   +  + S
Sbjct: 55  CNGLWRWIRLTYGQTNHIS 73


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 179 CPGVWAWVTLAQSRKMYFS 123
           C G+W W+ L   +  + S
Sbjct: 93  CNGLWRWIRLTYGQTNHIS 111


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 175 PVFGPGSHSPSLGKCTSPTS 116
           P+FG GS+ P  G  +   S
Sbjct: 33  PLFGWGSYGPEAGNVSCSVS 52


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 72  RPLHVIAYN*ARLKFDVG--EVHFPRLGECDPGPNTG 176
           +P  V+ +  A L  +V   E+H   L E  PG N G
Sbjct: 216 KPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 252


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 72  RPLHVIAYN*ARLKFDVG--EVHFPRLGECDPGPNTG 176
           +P  V+ +  A L  +V   E+H   L E  PG N G
Sbjct: 273 KPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 309


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 66  RKRPLHVIAY 95
           RKRP+H + Y
Sbjct: 358 RKRPMHNVVY 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,834
Number of Sequences: 438
Number of extensions: 1561
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)