Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_I05
(297 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 74 7e-14
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 74 7e-14
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 74 7e-14
AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding prote... 74 7e-14
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 74 7e-14
AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding prote... 74 7e-14
AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding prote... 74 7e-14
AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding prote... 62 4e-10
AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding prote... 51 8e-07
BC093875-1|AAH93875.1| 850|Homo sapiens protocadherin gamma sub... 27 8.2
BC093873-1|AAH93873.1| 850|Homo sapiens protocadherin gamma sub... 27 8.2
AF152503-1|AAD43764.1| 850|Homo sapiens protocadherin gamma A10... 27 8.2
AF152319-1|AAD43713.1| 936|Homo sapiens protocadherin gamma A10... 27 8.2
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 68 LKDELHHS 75
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 68 LKDELHHS 75
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 68 LKDELHHS 75
>AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding protein
1 protein.
Length = 201
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 68 LKDELHHS 75
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 68 LKDELHHS 75
>AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding protein
1 protein.
Length = 126
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 36 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 94
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 95 LKDELHHS 102
>AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding protein
1 protein.
Length = 349
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 271
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 51 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 109
Query: 272 VDNELHHS 295
+ +ELHHS
Sbjct: 110 LKDELHHS 117
>AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding protein
1 protein.
Length = 305
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVI 250
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI
Sbjct: 31 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVI 82
>AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding protein
1 protein.
Length = 295
Score = 50.8 bits (116), Expect = 8e-07
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = +2
Query: 98 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQDYLATVDVNPKSPTYSQVIYRTYTGSVD 277
GPGY++PL+A DYLATVDV+PKSP Y QVI+R ++
Sbjct: 9 GPGYSTPLEAMKG---------------TEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 53
Query: 278 NELHHS 295
+ELHHS
Sbjct: 54 DELHHS 59
>BC093875-1|AAH93875.1| 850|Homo sapiens protocadherin gamma
subfamily A, 10 protein.
Length = 850
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 200 LATVDVNPKSPTYSQVIYRTY 262
L D+N PT+SQV Y TY
Sbjct: 444 LQVADINDNPPTFSQVSYFTY 464
>BC093873-1|AAH93873.1| 850|Homo sapiens protocadherin gamma
subfamily A, 10 protein.
Length = 850
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 200 LATVDVNPKSPTYSQVIYRTY 262
L D+N PT+SQV Y TY
Sbjct: 444 LQVADINDNPPTFSQVSYFTY 464
>AF152503-1|AAD43764.1| 850|Homo sapiens protocadherin gamma A10
short form protein protein.
Length = 850
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 200 LATVDVNPKSPTYSQVIYRTY 262
L D+N PT+SQV Y TY
Sbjct: 444 LQVADINDNPPTFSQVSYFTY 464
>AF152319-1|AAD43713.1| 936|Homo sapiens protocadherin gamma A10
protein.
Length = 936
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 200 LATVDVNPKSPTYSQVIYRTY 262
L D+N PT+SQV Y TY
Sbjct: 444 LQVADINDNPPTFSQVSYFTY 464
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,551,806
Number of Sequences: 237096
Number of extensions: 737715
Number of successful extensions: 1476
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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