Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I05
         (297 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...    67   2e-12
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    25   7.4  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z81132-14|CAB03432.3|  378|Caenorhabditis elegans Hypothetical p...    25   9.7  
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U00043-12|AAC77504.2|  613|Caenorhabditis elegans Hypothetical p...    25   9.7  

>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score = 66.9 bits (156), Expect = 2e-12
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = +2

Query: 83  MSCCKGPGYASPLDAFNNGPREEILYVVAVQPDKSKQDYLATVDVNPKSPTYSQVIYRTY 262
           + C  GPGYASP DA   GPREE+L+V A        D + TVDVNP+S T+ QVI R  
Sbjct: 7   LKCHGGPGYASPADAIK-GPREEVLFVTAPNAADGP-DAIFTVDVNPESDTFCQVISRVD 64

Query: 263 TGSVDNELHHS 295
              + +E+HH+
Sbjct: 65  VPHIGDEVHHT 75


>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 213 protein.
          Length = 1437

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 119 LDAFNNGPREEILYVVAVQPDKSKQDYLATV 211
           L+ F N PR+++L++  ++     +DYL  +
Sbjct: 170 LEVFENFPRQKLLFIALLKEIDVVRDYLCAL 200


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 183 LSGCTATT*RISSLGPLLKASNGDA*PGPLQQDILNKQ 70
           L  CTATT   ++  P ++       P P+Q  I+ KQ
Sbjct: 334 LPSCTATTTTTTTQTPYIQTLAPAPAPAPVQIQIIQKQ 371


>Z81132-14|CAB03432.3|  378|Caenorhabditis elegans Hypothetical
           protein T26E4.3 protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 155 LYVVAVQPDKSKQDYLATVDVNPKSPTYS 241
           L   AV P+KSK D++    ++   P Y+
Sbjct: 208 LKAAAVIPEKSKNDFIICTHIHRGEPPYN 236


>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
            F13B9.1c protein.
          Length = 1609

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 287  EARYQRSPCMYDRLPGYMSVTSG*RPPLLNNP 192
            E+R+ ++  M + +   +SV  G  PP+L NP
Sbjct: 1042 ESRFLQTRSMSNPVTTLVSVAKGESPPVLTNP 1073


>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
            F13B9.1b protein.
          Length = 1614

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 287  EARYQRSPCMYDRLPGYMSVTSG*RPPLLNNP 192
            E+R+ ++  M + +   +SV  G  PP+L NP
Sbjct: 1042 ESRFLQTRSMSNPVTTLVSVAKGESPPVLTNP 1073


>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
            F13B9.1a protein.
          Length = 1632

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 287  EARYQRSPCMYDRLPGYMSVTSG*RPPLLNNP 192
            E+R+ ++  M + +   +SV  G  PP+L NP
Sbjct: 1064 ESRFLQTRSMSNPVTTLVSVAKGESPPVLTNP 1095


>U00043-12|AAC77504.2|  613|Caenorhabditis elegans Hypothetical
           protein T26A5.1 protein.
          Length = 613

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 104 GYASPLDAFNNGPREEILYVVAVQPDKSKQ 193
           G+  P D +N  P E I+Y +AVQP + KQ
Sbjct: 269 GHRVP-DEYN--PSEWIIYKLAVQPGQEKQ 295


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,427,707
Number of Sequences: 27780
Number of extensions: 119467
Number of successful extensions: 268
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)