Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I05
         (297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   3.2  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    20   5.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   7.4  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    20   7.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   9.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 171  TATT*RISSLGPLLKASNG 115
            T+ T RIS + P L A+NG
Sbjct: 1094 TSQTIRISWMSPPLSAANG 1112


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 161 VVAVQPDKSKQDYLATV 211
           VV +  DKS + +LATV
Sbjct: 446 VVVISNDKSTEFFLATV 462


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 151 NPLCGRCTARQ 183
           N  C RCT+RQ
Sbjct: 62  NNHCNRCTSRQ 72


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 157 KDFFSRSIIESI*WRCVAGS 98
           K FF RSI ++  ++C  G+
Sbjct: 208 KGFFRRSITKNAVYQCKYGN 227


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 157 KDFFSRSIIESI*WRCVAGS 98
           K FF RSI ++  ++C  G+
Sbjct: 5   KGFFRRSITKNAVYQCKYGN 24


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 237 IAR*SIVHTRGALITSFI 290
           IAR +++  +GAL++ FI
Sbjct: 439 IARWNVLGVQGALLSYFI 456


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,735
Number of Sequences: 438
Number of extensions: 1481
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)