BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_I02
(556 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 246 3e-67
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 25 1.3
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 5.1
AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450 CY... 23 8.9
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 23 8.9
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
protein.
Length = 1325
Score = 246 bits (603), Expect = 3e-67
Identities = 110/185 (59%), Positives = 143/185 (77%)
Frame = +2
Query: 2 LYQENSLTHYGQVLYHCTLQRCWEECIEKSHLRQRKLDIEQFNRQNRWRKRGISIIPTKF 181
+Y+E THY Q + C + +CW E ++ + +R+ +E+FN ++RWRKRGI ++PT F
Sbjct: 937 MYREGDTTHYNQQIEGCNVGKCWSEVLQSADFAKRREAVEKFNEEHRWRKRGIHVVPTMF 996
Query: 182 GIAFTEKLLNQAGALVLIYVDGSVLLSHGGTEMGQGLHTKMIQIASRALGIDVSKIHISE 361
GIAFT LNQ+GAL+ +Y DG+VLL+HGGTEMGQGLHTKMIQ+A+ ALGI +IHISE
Sbjct: 997 GIAFTVLHLNQSGALIHVYQDGTVLLTHGGTEMGQGLHTKMIQVAATALGIPFDRIHISE 1056
Query: 362 TATDKVPNTSATAASAGSDLNGMAVLDACQTLMKRLQPYKDKNPNGTWENWISAAYVDRV 541
T+TDKVPNTSATAASAGSDLNG AVL+AC T+ +RL+P + + P+ W W+S AY RV
Sbjct: 1057 TSTDKVPNTSATAASAGSDLNGTAVLNACLTIRERLEPIRKEFPDKDWNFWVSKAYFSRV 1116
Query: 542 SLSAT 556
SLSAT
Sbjct: 1117 SLSAT 1121
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 25.4 bits (53), Expect = 1.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 420 SMVWLCLTPVKL**KDYNHIKTRIQ 494
++VWL ++ KL DY+HI T +Q
Sbjct: 583 NLVWLNISDNKLEHFDYSHIPTHLQ 607
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.4 bits (48), Expect = 5.1
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 181 EFRWDY*NASFSPSILSIKLLYIKFSL 101
EFRW+Y + F +++++ +KF +
Sbjct: 484 EFRWNYEDYKFRTTVINMPGCPLKFEI 510
>AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450
CYP6M4 protein.
Length = 424
Score = 22.6 bits (46), Expect = 8.9
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 26 HYGQVLYHCTLQRCWEECIEKSHLRQ 103
H G++ Y ++ + EC+ K LR+
Sbjct: 281 HNGELTYEAAMEMDYLECVLKECLRK 306
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 22.6 bits (46), Expect = 8.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 23 THYGQVLYHCTLQRCWEECIEKSHLRQRKLDIEQFNRQNRWRKR 154
THY VL E+ K L++ ++++ NR+ +WRK+
Sbjct: 209 THYPDVLLR-------EKLAIKVDLKEERVEVWFKNRRAKWRKQ 245
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,990
Number of Sequences: 2352
Number of extensions: 11725
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -