Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_I02
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...   238   2e-63
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...   135   2e-32
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...   128   2e-30
AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical ...    32   0.32 
AL023847-4|CAA19550.1|  349|Caenorhabditis elegans Hypothetical ...    28   3.9  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    27   6.9  
AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
            F55B11.1 protein.
          Length = 1358

 Score =  238 bits (582), Expect = 2e-63
 Identities = 107/184 (58%), Positives = 141/184 (76%)
 Frame = +2

Query: 5    YQENSLTHYGQVLYHCTLQRCWEECIEKSHLRQRKLDIEQFNRQNRWRKRGISIIPTKFG 184
            Y+E   T +G  L  C + R W+EC + S    R  ++++FN  N++RKRGI + PT+FG
Sbjct: 974  YKEGDCTPFGMHLNQCNVTRTWDECRKNSDYDNRLEEVKKFNDSNKFRKRGIYLTPTRFG 1033

Query: 185  IAFTEKLLNQAGALVLIYVDGSVLLSHGGTEMGQGLHTKMIQIASRALGIDVSKIHISET 364
            I F  K LNQAGALVL+Y DGSVL+SHGG EMGQGLHTK++QIA+R L I + +IHI +T
Sbjct: 1034 IGFGLKQLNQAGALVLVYTDGSVLVSHGGMEMGQGLHTKILQIAARCLEIPIERIHIHDT 1093

Query: 365  ATDKVPNTSATAASAGSDLNGMAVLDACQTLMKRLQPYKDKNPNGTWENWISAAYVDRVS 544
            +TDKVPN SATAAS GSD+NG+AV DAC+ + +RL+ +K  +PNGTW++W+ AAYVDRVS
Sbjct: 1094 STDKVPNASATAASVGSDMNGLAVQDACRQINERLERFKKLDPNGTWDDWVKAAYVDRVS 1153

Query: 545  LSAT 556
            LSA+
Sbjct: 1154 LSAS 1157


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
            protein B0222.9 protein.
          Length = 1217

 Score =  135 bits (326), Expect = 2e-32
 Identities = 76/182 (41%), Positives = 103/182 (56%)
 Frame = +2

Query: 11   ENSLTHYGQVLYHCTLQRCWEECIEKSHLRQRKLDIEQFNRQNRWRKRGISIIPTKFGIA 190
            E    + G  +++  L  CWE C + S    R+  I+QFN+ +   KRGI++   +FG+ 
Sbjct: 859  EGGRRYLGGKIHNDALVECWEYCKKWSEFENRQSGIKQFNKNSTAVKRGIAMSSVRFGLP 918

Query: 191  FTEKLLNQAGALVLIYVDGSVLLSHGGTEMGQGLHTKMIQIASRALGIDVSKIHISETAT 370
                  +   +L LI +DGSV LS GGTEMGQGL+ KM+Q+ S AL   +  I I + +T
Sbjct: 919  HPGPTGHGIASL-LINLDGSVQLSIGGTEMGQGLNQKMLQVCSEALKRPIDTITIVDCST 977

Query: 371  DKVPNTSATAASAGSDLNGMAVLDACQTLMKRLQPYKDKNPNGTWENWISAAYVDRVSLS 550
            DKV N   T  S  +D NG+AVL  C+ +M RLQP  DKN +G WE  I  AY   V L 
Sbjct: 978  DKVTNAPETGGSQNADTNGLAVLACCKKIMSRLQPIIDKN-DGEWEKSIREAYGAYVPLQ 1036

Query: 551  AT 556
             T
Sbjct: 1037 CT 1038


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
            protein F15E6.6 protein.
          Length = 1228

 Score =  128 bits (310), Expect = 2e-30
 Identities = 70/164 (42%), Positives = 96/164 (58%)
 Frame = +2

Query: 65   CWEECIEKSHLRQRKLDIEQFNRQNRWRKRGISIIPTKFGIAFTEKLLNQAGALVLIYVD 244
            CWE C   S   +RK  IE FN+ ++  KRGI++   +  ++      +   +L +I +D
Sbjct: 887  CWEYCTRWSDFEKRKETIENFNKTSKIVKRGIAMSSVRLALSHPGPPGHGVASL-MINLD 945

Query: 245  GSVLLSHGGTEMGQGLHTKMIQIASRALGIDVSKIHISETATDKVPNTSATAASAGSDLN 424
            GS+ LS GGTEMGQGL+ KM+Q+ S AL   +  I I + +TDK+ N   T AS  +D N
Sbjct: 946  GSIQLSIGGTEMGQGLNQKMLQVCSEALKRPIDTITIVDCSTDKITNAPETGASHNADTN 1005

Query: 425  GMAVLDACQTLMKRLQPYKDKNPNGTWENWISAAYVDRVSLSAT 556
            G+AVL  C+ +M RLQP  DKN +G WE  I  AY   V L  T
Sbjct: 1006 GLAVLACCERIMSRLQPIIDKN-DGDWEKSIRDAYGAYVPLQCT 1048


>AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical
           protein F23H11.2 protein.
          Length = 865

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +2

Query: 8   QENSLTHYGQVLYHCTLQRCW-EECIEKSHLR----QRKLDIEQFNRQNRWRKR 154
           QEN L  + + L HC +  C  E+C    HLR       L  EQ  R+ + RKR
Sbjct: 145 QENILATFQKYLAHCQVAFCHSEQCGNDEHLRFVAVMENLRYEQEEREEKQRKR 198


>AL023847-4|CAA19550.1|  349|Caenorhabditis elegans Hypothetical
           protein Y57A10C.8 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 159 MPRFLHLFCLLNCSISSFLCLK*LFSIH 76
           +P FL L  ++NCS++   CL   F +H
Sbjct: 116 LPAFLKLVIVINCSMALDRCLAIFFPVH 143


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 173 LGLLKCLVFSIYFVY*TALYQVFFVLNDFFQYTLPN 66
           L L    V S +F Y    Y VFF +N   QY++PN
Sbjct: 577 LALQHPCVISCHFSYTNPKY-VFFPINRLLQYSIPN 611


>AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical
           protein Y57A10C.11 protein.
          Length = 262

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/47 (23%), Positives = 27/47 (57%)
 Frame = -3

Query: 167 LLKCLVFSIYFVY*TALYQVFFVLNDFFQYTLPNIFVKCSDIKLVHS 27
           L+  L++++Y        + FF   + F+YT+P   VK + ++++++
Sbjct: 114 LITILIYALYAYLAVGTTERFFAYEEEFRYTIPK-SVKLTSLQMIYT 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,481,131
Number of Sequences: 27780
Number of extensions: 245336
Number of successful extensions: 665
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)