Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_H24
         (389 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY278562-1|AAP35064.1|  963|Homo sapiens G-protein coupled recep...    28   9.3  
AY255620-1|AAO85132.1|  279|Homo sapiens G protein-coupled recep...    28   9.3  
AL137846-14|CAI10884.1|  963|Homo sapiens G protein-coupled rece...    28   9.3  
AB065601-1|BAC05829.1|  984|Homo sapiens seven transmembrane hel...    28   9.3  

>AY278562-1|AAP35064.1|  963|Homo sapiens G-protein coupled receptor
           GPR144 protein.
          Length = 963

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 136 TLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGM 17
           T+A+  +FLVA ++ ++    LW++     AV++ P PGM
Sbjct: 725 TVAMHFLFLVAFSWMLVEGLLLWRKV---VAVSMHPGPGM 761


>AY255620-1|AAO85132.1|  279|Homo sapiens G protein-coupled receptor
           PGR24 protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 136 TLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGM 17
           T+A+  +FLVA ++ ++    LW++     AV++ P PGM
Sbjct: 107 TVAMHFLFLVAFSWMLVEGLLLWRKV---VAVSMHPGPGM 143


>AL137846-14|CAI10884.1|  963|Homo sapiens G protein-coupled
           receptor 144 protein.
          Length = 963

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 136 TLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGM 17
           T+A+  +FLVA ++ ++    LW++     AV++ P PGM
Sbjct: 725 TVAMHFLFLVAFSWMLVEGLLLWRKV---VAVSMHPGPGM 761


>AB065601-1|BAC05829.1|  984|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 984

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 136 TLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGM 17
           T+A+  +FLVA ++ ++    LW++     AV++ P PGM
Sbjct: 149 TVAMHFLFLVAFSWMLVEGLLLWRKV---VAVSMHPGPGM 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,636,261
Number of Sequences: 237096
Number of extensions: 1150867
Number of successful extensions: 2534
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2534
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)