BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_H22
(540 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450 CY... 23 8.7
AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450 CY... 23 8.7
>AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450
CYPm3r5 protein.
Length = 519
Score = 22.6 bits (46), Expect = 8.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 424 ISGSPGFTGSHFTLEP 471
+ GSPGF G + L P
Sbjct: 73 VPGSPGFVGLYIFLNP 88
>AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450
CYP12F2 protein.
Length = 522
Score = 22.6 bits (46), Expect = 8.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 434 DPDINYLEIYS--PTKTEMKSSSDFGKRSFWDNLGLVE 327
DP+ + + Y PT + M+ + FG + + NL LVE
Sbjct: 38 DPEWSTAKPYESIPTPSFMEMARMFGSKGRYANLDLVE 75
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,460
Number of Sequences: 2352
Number of extensions: 7945
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -