Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_H18
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 0.70
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 1.2
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 1.2
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 3.7
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 3.7
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 5.0
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 5.0
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 5.0
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 27 5.0
Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 6.5
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 26 8.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 26 8.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 26 8.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 26 8.7
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.9 bits (64), Expect = 0.70
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 255 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 377
IG +DL+ LG A LDNV+ HG+ L P GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 207 GVKVPFAGNDKNIVSAIGSLDLTNRQ 284
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 207 GVKVPFAGNDKNIVSAIGSLDLTNRQ 284
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 3.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -2
Query: 319 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 146
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 145 ELVNSSGSS 119
E ++S S
Sbjct: 589 ENISSDFES 597
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 103 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 243
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 103 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 243
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 382 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 254
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 382 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 254
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 382 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 254
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 75 RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 176
R L+ +EP+ + +Y+ LLTSS + R +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704
>Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical
protein T28D6.7 protein.
Length = 322
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 386 CHLVSEPGDVCIRETYSVAVYIIQCHSSGCSA*FL 282
CH P CIR T ++ Y+I+ GC ++
Sbjct: 188 CHEDYPPAKGCIRATVLISGYLIKEKEQGCEVIYI 222
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = -2
Query: 379 LSPNPGMCVSVRLT--PWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTP 206
L+P P V RLT P P +++ + ++ P +T + P T P
Sbjct: 147 LAPVPKPVVVPRLTTLPTPAVITTEAKIFTTEAIATTPRAIPPAVVTTEATQPEVATTLP 206
Query: 205 APEVPSELSVRAP 167
P SE AP
Sbjct: 207 EPSTTSEPLTSAP 219
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 341 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 225
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 506 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 544
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 341 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 225
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 1035 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 1073
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 341 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 225
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 716 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 754
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 341 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 225
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 506 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 544
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 341 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 225
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 1035 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 1073
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 341 YSVAVYIIQCHSSGCSA*FLPIS*V*GTDSAYYILVVTS 225
++VA+ +++C S L I V GTDSA L+VTS
Sbjct: 716 HTVALALLKCRSQDEGPYTLTIENVHGTDSADVKLLVTS 754
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 26.2 bits (55), Expect = 8.7
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -2
Query: 373 PNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEV 194
P PG + + T + T A A PS + KS +PIA I S+ +
Sbjct: 1101 PRPGGIIVMSPTNQTDSAPPPTGAAAKPSRFQVTKSADPIATPISSSISTATVIPIVAAT 1160
Query: 193 PSELS 179
P+ ++
Sbjct: 1161 PTNIT 1165
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 26.2 bits (55), Expect = 8.7
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = -2
Query: 373 PNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEV 194
P PG + + T + T A A PS + KS +PIA I S+ +
Sbjct: 1101 PRPGGIIVMSPTNQTDSAPPPTGAAAKPSRFQVTKSADPIATPISSSISTATVIPIVAAT 1160
Query: 193 PSELS 179
P+ ++
Sbjct: 1161 PTNIT 1165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,986,005
Number of Sequences: 27780
Number of extensions: 168737
Number of successful extensions: 466
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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