Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_H15
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070971-1|AAL48593.1|  141|Drosophila melanogaster RE06996p pro...    33   0.21 
AE013599-3602|AAM68251.1|  141|Drosophila melanogaster CG30411-P...    33   0.21 
AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    32   0.47 
BT023819-1|AAZ86740.1|  741|Drosophila melanogaster SD06601p pro...    29   5.8  
AY070562-1|AAL48033.1|  716|Drosophila melanogaster LD38760p pro...    29   5.8  
AJ606680-1|CAE54809.1|  741|Drosophila melanogaster lamin B rece...    29   5.8  
AE013599-3273|AAM71016.1|  716|Drosophila melanogaster CG17952-P...    29   5.8  
AE013599-3272|AAF46760.2|  716|Drosophila melanogaster CG17952-P...    29   5.8  
AE013599-3271|AAM71015.1|  741|Drosophila melanogaster CG17952-P...    29   5.8  
AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-P...    28   7.7  

>AY070971-1|AAL48593.1|  141|Drosophila melanogaster RE06996p
           protein.
          Length = 141

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 25/96 (26%), Positives = 39/96 (40%)
 Frame = +2

Query: 8   VVTFTIILSSVVLLAEGSHLVIGNTANRVKLANHTDVQYNAIPFIKRVKYFFYSQLDNRV 187
           +V    +L   VLL   + +  G+      + +  DV        + V Y      DN  
Sbjct: 25  LVVLLCLLPGQVLLGNAASVTWGHVNKYASVLHTEDVYLTPGSPGRDVAYGLQKASDNYR 84

Query: 188 IQGIQALDNLHSKATINITAGGVGHTFVNLRMKSER 295
           I G+   D    +A   +T+GG+G  FV LR +  R
Sbjct: 85  ITGVHVEDLGADEAEAVLTSGGIGQQFVVLRCRRLR 120


>AE013599-3602|AAM68251.1|  141|Drosophila melanogaster CG30411-PA
           protein.
          Length = 141

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 25/96 (26%), Positives = 39/96 (40%)
 Frame = +2

Query: 8   VVTFTIILSSVVLLAEGSHLVIGNTANRVKLANHTDVQYNAIPFIKRVKYFFYSQLDNRV 187
           +V    +L   VLL   + +  G+      + +  DV        + V Y      DN  
Sbjct: 25  LVVLLCLLPGQVLLGNAASVTWGHVNKYASVLHTEDVYLTPGSPGRDVAYGLQKASDNYR 84

Query: 188 IQGIQALDNLHSKATINITAGGVGHTFVNLRMKSER 295
           I G+   D    +A   +T+GG+G  FV LR +  R
Sbjct: 85  ITGVHVEDLGADEAEAVLTSGGIGQQFVVLRCRRLR 120


>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 227 ATINITAGGVGHTFVNLRMKSERGRGL 307
           AT  IT+GGVG T V ++  S RG G+
Sbjct: 86  ATAEITSGGVGSTTVTIKFTSARGAGI 112


>BT023819-1|AAZ86740.1|  741|Drosophila melanogaster SD06601p
           protein.
          Length = 741

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 93  SNWPITLTFNTTLYLSSRELNISSIHNSITELSRASKRWTT 215
           SN P+TLT NT+    ++  N SS+ NS    SR +   TT
Sbjct: 152 SNLPMTLTTNTSSGAPNKAFNTSSV-NSGNSFSRTTTSSTT 191


>AY070562-1|AAL48033.1|  716|Drosophila melanogaster LD38760p
           protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 93  SNWPITLTFNTTLYLSSRELNISSIHNSITELSRASKRWTT 215
           SN P+TLT NT+    ++  N SS+ NS    SR +   TT
Sbjct: 127 SNLPMTLTTNTSSGAPNKAFNTSSV-NSGNSFSRTTTSSTT 166


>AJ606680-1|CAE54809.1|  741|Drosophila melanogaster lamin B
           receptor protein.
          Length = 741

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 93  SNWPITLTFNTTLYLSSRELNISSIHNSITELSRASKRWTT 215
           SN P+TLT NT+    ++  N SS+ NS    SR +   TT
Sbjct: 152 SNLPMTLTTNTSSGAPNKAFNTSSV-NSGNSFSRTTTSSTT 191


>AE013599-3273|AAM71016.1|  716|Drosophila melanogaster CG17952-PB,
           isoform B protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 93  SNWPITLTFNTTLYLSSRELNISSIHNSITELSRASKRWTT 215
           SN P+TLT NT+    ++  N SS+ NS    SR +   TT
Sbjct: 127 SNLPMTLTTNTSSGAPNKAFNTSSV-NSGNSFSRTTTSSTT 166


>AE013599-3272|AAF46760.2|  716|Drosophila melanogaster CG17952-PA,
           isoform A protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 93  SNWPITLTFNTTLYLSSRELNISSIHNSITELSRASKRWTT 215
           SN P+TLT NT+    ++  N SS+ NS    SR +   TT
Sbjct: 127 SNLPMTLTTNTSSGAPNKAFNTSSV-NSGNSFSRTTTSSTT 166


>AE013599-3271|AAM71015.1|  741|Drosophila melanogaster CG17952-PC,
           isoform C protein.
          Length = 741

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 93  SNWPITLTFNTTLYLSSRELNISSIHNSITELSRASKRWTT 215
           SN P+TLT NT+    ++  N SS+ NS    SR +   TT
Sbjct: 152 SNLPMTLTTNTSSGAPNKAFNTSSV-NSGNSFSRTTTSSTT 191


>AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-PA
           protein.
          Length = 117

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
 Frame = +2

Query: 5   SVVTFTIILSSVVLLAEGSHLVIGNTANRVKLANHTDVQYNAIPFIKRVKYFFYSQLDNR 184
           +++ F +    +   A   +L     A+  +LA  T  +   +  ++  KY F  Q DN 
Sbjct: 5   TIILFALAAFILPTFAANDYLWGEVGADDYQLAKDTVSKAFFVGLVQTKKYVF-KQSDNL 63

Query: 185 ---VIQGIQALDNLHSK-ATINITAGGVGHTFVNLRMKSERGRGL 307
               I  I+  D   S  AT  + +GG G     ++  SERG G+
Sbjct: 64  NALTITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGI 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,157,493
Number of Sequences: 53049
Number of extensions: 403340
Number of successful extensions: 1237
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)