Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_H05
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   0.76 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   0.76 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   1.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   7.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.4  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 345 KLNFANNNCSNRSYNR 298
           K N+ NNN +N +YN+
Sbjct: 95  KYNYNNNNYNNNNYNK 110


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 345 KLNFANNNCSNRSYNR 298
           K N+ NNN +N +YN+
Sbjct: 95  KYNYNNNNYNNNNYNK 110


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 345 KLNFANNNCSNRSYN 301
           K N+ NNN +N +YN
Sbjct: 330 KYNYNNNNYNNNNYN 344


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 339 NFANNNCSNRSYN 301
           N+ NNN +N +YN
Sbjct: 95  NYNNNNYNNYNYN 107


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 448 DGPGNYETIHHKVV 489
           DGP  Y  IH K +
Sbjct: 535 DGPARYNIIHFKQI 548


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 345 KLNFANNNCSNRSYN 301
           K NFAN  C N + N
Sbjct: 103 KKNFANKYCGNITLN 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,230
Number of Sequences: 438
Number of extensions: 2190
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)