Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_H02
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117204-13|CAB55128.1|  286|Caenorhabditis elegans Hypothetical...    28   4.7  
AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical...    28   6.2  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    27   8.2  

>AL117204-13|CAB55128.1|  286|Caenorhabditis elegans Hypothetical
           protein Y116A8C.22 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 150 CTNCQLRRHLRCYGQGTYNWKRKSQAQC 233
           CT CQ   HL+C G  +  W   SQ QC
Sbjct: 256 CTKCQKWVHLKCTGIRSKQW--NSQFQC 281


>AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical
           protein K04F10.7 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 411 QCQSIRH*KPAKYSSSSELQHCRCRSGLHVQGQDWC 518
           QCQ  +    AKY      Q+C+  +  H Q   WC
Sbjct: 25  QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 250 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 351
           L  +MK+  A A +AY  DNVNG    L++   PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.2 protein.
          Length = 1594

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 446 IFLKFRTSTLSVPEWTTCSRTR--LVHLRPPXTPMSLIVMTTLWGET 580
           I +K +  TL V  W+T S     L  L PP +P SL+V+    G+T
Sbjct: 187 IAVKTKDGTLCV--WSTSSEPSCPLPSLPPPDSPSSLVVLPAAAGKT 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,094,754
Number of Sequences: 27780
Number of extensions: 324183
Number of successful extensions: 822
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)