Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G22
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0383 + 7966929-7968951,7969085-7969104 29 0.89
02_05_1162 - 34593101-34594624 29 0.89
02_05_1000 + 33417357-33417600,33417692-33417744,33418376-334184... 29 0.89
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 28 1.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 1.6
11_06_0251 - 21707953-21708455,21709230-21710284,21711187-21711299 27 2.7
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 27 2.7
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 27 2.7
04_01_0013 - 217743-217839,218021-218131,218226-218428,218540-21... 27 2.7
02_05_1145 + 34429060-34429401,34430053-34430967 27 3.6
05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003 26 4.7
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 26 6.3
06_03_0683 - 23490215-23490997 26 6.3
05_04_0385 - 20817073-20817321,20817474-20817660,20817851-20817918 26 6.3
05_04_0163 + 18652306-18652839,18653785-18653853,18655139-186552... 26 6.3
04_03_0476 - 16363811-16364101,16364515-16364763,16365008-163651... 26 6.3
11_06_0163 + 20821109-20821250,20827123-20827415,20828279-20830426 25 8.3
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 25 8.3
04_03_0477 - 16393764-16394054,16394424-16394672,16394849-163949... 25 8.3
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 25 8.3
>03_02_0383 + 7966929-7968951,7969085-7969104
Length = 680
Score = 28.7 bits (61), Expect = 0.89
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 188 LRCIDFKYMCPV*PPFKLIRPALEPDTELVL*EGSPPNL 72
LRCI +C P + RP+ E E++ EG PPNL
Sbjct: 619 LRCITVALLCIQRSPSR--RPSSEEVLEMLSGEGEPPNL 655
>02_05_1162 - 34593101-34594624
Length = 507
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 154 TGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPGLYT 264
T YL Q +P P PSS P T + +PG YT
Sbjct: 356 TPEYYLPKYQEKPAAPP--PSSAPPPTAFLPVPGRYT 390
>02_05_1000 +
33417357-33417600,33417692-33417744,33418376-33418413,
33418720-33419114,33420092-33420221,33420512-33421343
Length = 563
Score = 28.7 bits (61), Expect = 0.89
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 79 GGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVK-WPSSTPLT 231
GGD +T + GSSAG+ + K + +L + + P + P PLT
Sbjct: 82 GGDDDKATEGIRGSSAGMYTDKRSVSEDTHLYPSTKPTIKPARPQPQMHPLT 133
>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 7 AESVDKPDTSYQYQPLSIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGY 153
+ SVDKP + + PL + G D Y +S SS L++ K Y
Sbjct: 1425 SSSVDKPSSLWTTSPLRFDGFEDDGDDGKY-CKIISRSSNHLVNKKSNY 1472
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 NAESVDKPDTSYQYQPLSIP-AYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTG 159
N++S P +SY P S P +Y +P YS + G + S GGY G
Sbjct: 332 NSDSAVPPPSSYGGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGG 384
>11_06_0251 - 21707953-21708455,21709230-21710284,21711187-21711299
Length = 556
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 112 SGSSAGLMSLKGGYTGHIYLKSIQR 186
SGSSA L ++ GYT YL+ +Q+
Sbjct: 349 SGSSAVLERMRRGYTREAYLELVQK 373
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 132 DEFKRRLHRAHIFEINTTETSTSCEMA*FNAIDHTGRINSWTLYIS 269
D+F R R IF+++ STS E +A H ++S T Y++
Sbjct: 39 DKFSRLTTRTTIFQVSNYSRSTSMERFQLSARFHQPVVDSSTNYLT 84
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 GGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVKWPS-STPLTTPVVLI 249
GG + ST + + +SA S+ GG G + R V PV++PS S+P +P + I
Sbjct: 21 GGAATASTPASASASASFPSVSGGGCGDGWPSPQNPRSV-PVQFPSPSSPPPSPPIEI 77
>04_01_0013 -
217743-217839,218021-218131,218226-218428,218540-218654,
219038-219204,219505-219565,219872-219990,220206-220286
Length = 317
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 139 LKGGYTGHIYLKSIQRRPVPPVKWPSSTPLTTP 237
L G Y IYL+ QR P+ +K SS + P
Sbjct: 209 LSGMYVSWIYLRYFQRNPLTGLKGDSSDDFSFP 241
>02_05_1145 + 34429060-34429401,34430053-34430967
Length = 418
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 49 PLSIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPV 204
P+S+ ++ F + ++S S SSA S +G + + RP PPV
Sbjct: 179 PISVLEHSGFNVATNGGSSSSSSSSASSSSESFSGSGRAWSAPVSPRPEPPV 230
>05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003
Length = 385
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 160 HIYLKSIQRRPVPPVKWPSSTPLTTPVV 243
H++ I RRP PP P TP P +
Sbjct: 29 HLHTFLIPRRPCPPPVRPPDTPAMPPAL 56
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 25.8 bits (54), Expect = 6.3
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 49 PLSIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVKWPSSTPL 228
P+S P G+ + T +V G + S+ G+ +LKSI V + + PL
Sbjct: 128 PVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSAGYAFLKSISDEDSVSV-FCFAIPL 186
Query: 229 TTPVVL 246
T VV+
Sbjct: 187 YTGVVV 192
>06_03_0683 - 23490215-23490997
Length = 260
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 181 QRRPVPPVKWPSSTPLTTPVVLIP 252
++RP PP K P + P T P + P
Sbjct: 4 RKRPPPPAKAPEAPPETKPKISPP 27
>05_04_0385 - 20817073-20817321,20817474-20817660,20817851-20817918
Length = 167
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 55 SIPAYNRFGGDPSYSTNSVSGSSAGLMSLKGGYTGHI 165
++P + G+ + ST+S + + + +L+GGY G +
Sbjct: 50 TLPKLIQLKGNQTQSTSSFANAMVKMGNLRGGYPGEL 86
>05_04_0163 +
18652306-18652839,18653785-18653853,18655139-18655270,
18655424-18655477,18655570-18655614,18656166-18656305,
18657107-18657232,18657325-18657361
Length = 378
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 97 STNSVSGSSAGLMSLKGGYTGHIYLKSIQRRPVPPVKWPSSTPLTTPVV 243
S NS+S +S S + H++L+ Q PVP + +P S PL PV+
Sbjct: 5 SPNSLSAASHPTSSSS---SFHLHLQLQQ--PVPHLPFPRSLPLNLPVL 48
>04_03_0476 -
16363811-16364101,16364515-16364763,16365008-16365143,
16365552-16365770,16366210-16366588,16366909-16367089
Length = 484
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 52 LSIPAYNRFGGDPSYSTNSVSGSSAGLMSL 141
+S A+N+F GD N ++ GL+SL
Sbjct: 58 VSPDAFNKFKGDDGKFRNDIANDPKGLLSL 87
>11_06_0163 + 20821109-20821250,20827123-20827415,20828279-20830426
Length = 860
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 146 PFKLIRPALEPDTELVL 96
PFKL++ L PD+E +L
Sbjct: 318 PFKLLQQVLTPDSEFIL 334
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 25.4 bits (53), Expect = 8.3
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 76 FGGDPSYSTNSVSGSSAGLMSLKGGY--TGHIYLKSIQRRPVPP--VKWPSSTPLTTPVV 243
FG PS+S N VS ++AGL + + TG + + R VPP ++ P+ L P
Sbjct: 170 FGNRPSFSYNVVSHANAGLPTGQQFQLDTGTNHAVQVSRF-VPPSSLQPPAPMNLARPSS 228
Query: 244 LIPG 255
PG
Sbjct: 229 AFPG 232
>04_03_0477 -
16393764-16394054,16394424-16394672,16394849-16394989,
16395654-16395795,16396287-16396665,16397178-16397436,
16398232-16398288
Length = 505
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 64 AYNRFGGDPSYSTNSVSGSSAGLMSL 141
A+N+F GD N ++ GL+SL
Sbjct: 107 AFNKFKGDDGRFRNEIANDPRGLLSL 132
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 148 GYTGHIYLKSIQRRPVPPVKWPSSTPLTTPVVLIPG 255
G G + + ++ P+P +KW T T PV + G
Sbjct: 43 GDNGASWSQLLETLPLPNIKWICPTAPTRPVAVFGG 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.132 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,684,992
Number of Sequences: 37544
Number of extensions: 169101
Number of successful extensions: 404
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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