Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_G22
         (301 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   0.81 
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   1.1  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   2.5  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   2.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   3.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    20   7.6  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 0.81
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 76  FGGDPSYSTNSVSGSSAGLMS 138
           F  DP Y+T +++G S  L S
Sbjct: 229 FASDPRYTTFTINGESFTLQS 249


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 300 QAFCPAIVFQMICIK 256
           Q FCP +V + +CIK
Sbjct: 51  QRFCPNVVPKPLCIK 65


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 300 QAFCPAIVFQMICIK 256
           Q FCP +V + +CIK
Sbjct: 51  QRFCPNVVPKPLCIK 65


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 23  NRILRTNTNHYLYQPIIDLAEILLTVLIP 109
           N+ + T TN+YL+   +    +L++ L P
Sbjct: 81  NKSMHTATNYYLFSLAVSDLLLLISGLPP 109


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 171 EINTTETSTSCEMA*FNAIDHTGRIN 248
           E    ++   C M  FN +D  G  N
Sbjct: 55  EDENVQSYVECMMKKFNVVDENGNFN 80


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 14  LLINRILRTNTNHYLYQPIIDLAEILLTVL 103
           L IN I +TN  +YL + +  +   L  V+
Sbjct: 740 LSINNIQKTNEGYYLCEAVNGIGAGLSAVI 769


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 171 QIYVPCV 151
           Q+YVPCV
Sbjct: 250 QVYVPCV 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.132    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,875
Number of Sequences: 438
Number of extensions: 1910
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.0 bits)