BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G16
(527 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016083-1|AAV36968.1| 856|Drosophila melanogaster LD44383p pro... 29 3.9
BT001469-1|AAN71224.1| 1075|Drosophila melanogaster LD02622p pro... 29 3.9
AE013599-11|EAA46158.1| 856|Drosophila melanogaster CG17665-PB,... 29 3.9
AE013599-10|EAA46157.1| 1068|Drosophila melanogaster CG17665-PA,... 29 3.9
AE014298-1752|AAF48146.2| 248|Drosophila melanogaster CG11356-P... 28 6.8
>BT016083-1|AAV36968.1| 856|Drosophila melanogaster LD44383p
protein.
Length = 856
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 342 KVQNCFLNDSNIVFKLNTEIILW 274
K+ NC L D +++ K NT I LW
Sbjct: 522 KIGNCLLRDLDLLEKENTNIFLW 544
>BT001469-1|AAN71224.1| 1075|Drosophila melanogaster LD02622p
protein.
Length = 1075
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 342 KVQNCFLNDSNIVFKLNTEIILW 274
K+ NC L D +++ K NT I LW
Sbjct: 734 KIGNCLLRDLDLLEKENTNIFLW 756
>AE013599-11|EAA46158.1| 856|Drosophila melanogaster CG17665-PB,
isoform B protein.
Length = 856
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 342 KVQNCFLNDSNIVFKLNTEIILW 274
K+ NC L D +++ K NT I LW
Sbjct: 522 KIGNCLLRDLDLLEKENTNIFLW 544
>AE013599-10|EAA46157.1| 1068|Drosophila melanogaster CG17665-PA,
isoform A protein.
Length = 1068
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 342 KVQNCFLNDSNIVFKLNTEIILW 274
K+ NC L D +++ K NT I LW
Sbjct: 734 KIGNCLLRDLDLLEKENTNIFLW 756
>AE014298-1752|AAF48146.2| 248|Drosophila melanogaster CG11356-PA
protein.
Length = 248
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 435 AYILRYLSKSCDCRLLLC 382
A+ L L+KSCDC LL+C
Sbjct: 159 AFGLEELAKSCDCPLLIC 176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,282,217
Number of Sequences: 53049
Number of extensions: 335559
Number of successful extensions: 526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -