Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G11
(526 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 213 7e-58
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 213 7e-58
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 5.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 5.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 5.8
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.7
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 213 bits (521), Expect = 7e-58
Identities = 98/114 (85%), Positives = 107/114 (93%)
Frame = +2
Query: 182 SNLADPVASAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFV 361
S LADPVA AKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+E+QRYKG++D FV
Sbjct: 2 SGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFV 61
Query: 362 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYF 523
RIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF RYF
Sbjct: 62 RIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYF 115
Score = 28.3 bits (60), Expect = 0.051
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 179 RSNLADPVASAKDFLAGGISAAVSKTAVA---PIERVKLLLQVQHVSKQIAEDQRYKGIV 349
R L DP ++ GI+ V+ A P + V+ + +Q S + + YK +
Sbjct: 201 RGMLPDP-KKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQ--SGRAKSEILYKSTL 257
Query: 350 DAFVRIPKEQGLLSFWRGNFANVIR 424
+ I K +G +F++G F+N++R
Sbjct: 258 HCWATIYKTEGGNAFFKGAFSNILR 282
Score = 26.6 bits (56), Expect = 0.16
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 224 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRG 403
+GG + A S V P++ + L V K E + + G+ + +I K G+ +RG
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAAD-VGKAGGE-REFTGLGNCLTKIFKADGITGLYRG 178
Query: 404 NFANVIRYFPTQALNFAFKD 463
+V +A F F D
Sbjct: 179 FGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 213 bits (521), Expect = 7e-58
Identities = 98/114 (85%), Positives = 107/114 (93%)
Frame = +2
Query: 182 SNLADPVASAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFV 361
S LADPVA AKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+E+QRYKG++D FV
Sbjct: 2 SGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFV 61
Query: 362 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYF 523
RIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF RYF
Sbjct: 62 RIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYF 115
Score = 28.3 bits (60), Expect = 0.051
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 179 RSNLADPVASAKDFLAGGISAAVSKTAVA---PIERVKLLLQVQHVSKQIAEDQRYKGIV 349
R L DP ++ GI+ V+ A P + V+ + +Q S + + YK +
Sbjct: 201 RGMLPDP-KKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQ--SGRAKSEILYKSTL 257
Query: 350 DAFVRIPKEQGLLSFWRGNFANVIR 424
+ I K +G +F++G F+N++R
Sbjct: 258 HCWATIYKTEGGNAFFKGAFSNILR 282
Score = 26.6 bits (56), Expect = 0.16
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 224 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRG 403
+GG + A S V P++ + L V K E + + G+ + +I K G+ +RG
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLAAD-VGKAGGE-REFTGLGNCLTKIFKADGITGLYRG 178
Query: 404 NFANVIRYFPTQALNFAFKD 463
+V +A F F D
Sbjct: 179 FGVSVQGIIIYRAAYFGFYD 198
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 5.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 321 AICLLTCWT 295
A C+L+CWT
Sbjct: 103 ATCVLSCWT 111
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 5.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 321 AICLLTCWT 295
A C+L+CWT
Sbjct: 156 ATCVLSCWT 164
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 5.8
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 409 EVTTPE*EQTLLLGNADEGVDDTLVAL--VLGDLF 311
E+T P E+T+ + N E + +T V +L D F
Sbjct: 368 EITVPSNEETIDINNGAELMQETHVCFFSLLRDAF 402
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 46 DHEITPNLLIKNRGFVFRGFSIPCVPKSFLVRKYPP 153
D ++P I+NR + G S P + K+PP
Sbjct: 374 DLRMSPLPSIRNRSGLVSGSSTPGTGREHDPAKFPP 409
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,495
Number of Sequences: 438
Number of extensions: 3310
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -