Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_G06
         (192 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   0.44 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   7.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   7.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              18   9.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    18   9.4  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 0.44
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 36  GERFPSDLPYELPLR 80
           GE FPS + ++LPL+
Sbjct: 131 GEVFPSKMDHQLPLK 145


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 4   RKPKNGLKR**VNDSLQICPMNYR 75
           +K +NG  +  +N +   CP N R
Sbjct: 294 KKERNGPTQTTLNATTLFCPPNLR 317


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 4   RKPKNGLKR**VNDSLQICPMNYR 75
           +K +NG  +  +N +   CP N R
Sbjct: 384 KKERNGPTQTTLNATTLFCPPNLR 407


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 106 ISLHRMMPFLSGSS 65
           + +HR   F+ GSS
Sbjct: 241 VPVHRWYKFIEGSS 254


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +2

Query: 92  SMQADEQTATRINLQSQCIRR 154
           SM AD+      N++  C+++
Sbjct: 23  SMSADQVEKLAKNMRKSCLQK 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,692
Number of Sequences: 438
Number of extensions: 692
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)