Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_G05
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   9.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   9.1  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 49 PVDPARGSNPRPQNG 5
          P  P RGS P P  G
Sbjct: 31 PQAPQRGSPPNPSQG 45


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 58  NPIPVDPARGSNPRPQNGS 2
           +P    P RGS+P  Q+G+
Sbjct: 322 HPSQYHPHRGSSPHHQHGN 340


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 27  DPRAGSTGIGFFYSISSRSLEFVPYM 104
           +P +G+TGIG   + + R  + +  M
Sbjct: 103 EPTSGNTGIGLAMAAAVRGYKCIIVM 128


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 160 PHFAELSSVPDVTGGE 113
           P F  +SS PDV  G+
Sbjct: 896 PRFYSISSSPDVHQGQ 911


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,949
Number of Sequences: 438
Number of extensions: 2585
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)