Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G03
(566 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 0.16
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 30 0.21
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.48
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.63
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 28 0.83
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 28 1.1
SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces p... 27 1.5
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 27 2.5
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 27 2.5
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 26 4.4
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 4.4
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 26 4.4
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 25 5.9
SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease XPF... 25 5.9
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 25 5.9
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 25 5.9
SPBC409.21 |sec66||ER protein translocation subcomplex subunit S... 25 7.7
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 25 7.7
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.7 bits (66), Expect = 0.16
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 218 ASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNLVISL 397
A E+ ++ I + M SV EL K+I SLEK NKD + LR+ + SL
Sbjct: 1460 AIELKALKDQINSEKAKMFSVQVQYEKREQELQKRIASLEKVNKDSLIDVRALRDRIASL 1519
Query: 398 Q 400
+
Sbjct: 1520 E 1520
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 30.3 bits (65), Expect = 0.21
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = -3
Query: 456 AFEVEIATPPEDSKLSTLACRLMTKLRKSSIAFLKSLFSFSRLPIFLISSVL 301
+FEV + T ++K ++ RL ++ S+ F SLF++ + + +I+ V+
Sbjct: 202 SFEVRMLTHENNNKKNSYVFRLFDRVSSSTFYFFNSLFAYFIILLRIINEVI 253
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.48
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 305 TELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLES 424
T+ K+ S E+ENK K +ID+ +N + S V + S
Sbjct: 388 TDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSS 427
Score = 28.7 bits (61), Expect = 0.63
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 164 ESLYKVNDSPLSITKSSL-ASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEK 340
E L + LS+T L K +IK+SL + + TL + ++ + SL+K
Sbjct: 1608 EELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLS--EDLRTLRSLEDS-----VASLQK 1660
Query: 341 ENKDFKKAIDDLRNLVISLQARVDNLE 421
E K ++ L++++ S+QAR LE
Sbjct: 1661 ECKIKSNTVESLQDVLTSVQARNAELE 1687
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 0.63
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +2
Query: 137 YNDAEKNYYESLYKVNDSP---LSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNT 307
+ D Y+ L N S L+ + L + K EH ++ E + S + VPN+
Sbjct: 618 FTDETNGYFTLLNDFNASMEELLNTHSNQLLISMTKITEHFQSLDEALQSARSSCAVPNS 677
Query: 308 ELIKKIGSLEKENKDFKKAID-DLRNLVISLQARVDNLES 424
L + L+ A++ L+++ +S Q + + S
Sbjct: 678 SLDLIVSELKDSKNSLLDALEHSLQDISMSSQKLGNGISS 717
>SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1462
Score = 28.3 bits (60), Expect = 0.83
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 86 SKMSVLIHEKVWLDKNVYNDAEKNYYESLY-KVNDSPLSITKSSLASEVAKAREHIKNSL 262
++M +I + V +D NV + A+K +L+ K+ D + ++ + +A+ E IKN
Sbjct: 1336 AQMFNIICKTVLIDMNVLS-AQKEMLHTLWLKLMDVAIKLSSIHGSESMAEVMESIKNVF 1394
Query: 263 ECMDSVATLAGVPNTELIKKI 325
+ LAG P E+ +I
Sbjct: 1395 MILHGAGALAG-PTIEVDPEI 1414
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 134 VYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKN 256
+ N+ +K Y E +YKVN + + ++S+ S K+ + KN
Sbjct: 101 IANNKQKGYDEEMYKVNPASRNKSQSNNISSHEKSSKTTKN 141
>SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 227
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/61 (22%), Positives = 34/61 (55%)
Frame = +2
Query: 194 LSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDD 373
+ + ++S+A ++AK+ K+ LE ++S + + + KK+ +E++ + K + D
Sbjct: 59 MKLKRASMAQKIAKSNVLNKSRLEILNSKQKVIDDIFSRVEKKLDGIEQKKDAYTKFMAD 118
Query: 374 L 376
L
Sbjct: 119 L 119
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 26.6 bits (56), Expect = 2.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 104 IHEKVWLDKNVYNDAEKNY--YESLYKVNDSPLS--ITKSSLASEVAKAREHIKNSLE 265
+HEK +D N Y DA +E K D+ S I+K+ + + + RE K E
Sbjct: 116 LHEKKVIDDNQYKDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEEDRERHKRMRE 173
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 26.6 bits (56), Expect = 2.5
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 83 YSKMSVLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSL 262
Y + + IH+ + + D Y+E Y + + + L ++V A +++ L
Sbjct: 307 YDEFMIKIHKGI-TSMQLDEDYTDEYWEKRYVIREDQVPPQLLDLQNKVLFAGKYLNVVL 365
Query: 263 ECMDSVATLAGV 298
EC V LA +
Sbjct: 366 ECRKGVNNLASL 377
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 167 SLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLE 337
S Y +ND S+ K + E +H+ L+ D+ A + T+ K+ +E
Sbjct: 1012 SKYTLNDIHESVYKFAFPQEQLTLGKHVVRLLQVRDANGCAASITKTQPAAKVSVVE 1068
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 317 KKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAISTSKAP 460
KK+ SLE +K F K L +Q + + LE IS + P
Sbjct: 8 KKLKSLEYRSKKFDKKSQSLEEHEKKVQQKNEELEKKAADKISRDELP 55
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 4.4
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +2
Query: 128 KNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLE-CMDSVATLAGVPN 304
KN AE+++ + ++ S + S L E + ++ M V +
Sbjct: 297 KNELQSAEEHFSHKIKELT-SENELKISRLQEEKDSLLKKVQEGASLAMQRVQNKHDLEK 355
Query: 305 TELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESS 427
L I L++EN K+ I+ L+ + S +NL+SS
Sbjct: 356 KRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSS 396
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 25.4 bits (53), Expect = 5.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 296 VPNTELIKKIGSLEKENKDFKKAIDDLRN 382
+P + G LE++ DF++ DDL N
Sbjct: 10 LPKENMFPNEGQLEEDGIDFEETYDDLGN 38
>SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease
XPF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 892
Score = 25.4 bits (53), Expect = 5.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 360 FLKSLFSFSRLPIFLISSVLGTPANVATLSIH 265
FL+ +F + R + + S+ +PANV L+++
Sbjct: 179 FLRHVFIYPRFHVVVAESLEKSPANVVELNVN 210
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 5.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 80 NYSKMSVLIHEKVWLDKNVYN 142
N SK+ V +H++ W+D+ N
Sbjct: 223 NSSKVKVFVHDEKWIDEQKMN 243
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 5.9
Identities = 22/114 (19%), Positives = 47/114 (41%)
Frame = +2
Query: 80 NYSKMSVLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNS 259
N+S+ S + + + VYN + + L T S ++A EH++ +
Sbjct: 214 NFSQASQDLKTALEWKEKVYNVSNNTLLSEAHYKLALALEFTNPEDPSNKSRACEHVEKA 273
Query: 260 LECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLE 421
E + +V T+ K G + E +++LR ++ L+ + +L+
Sbjct: 274 AEILKNVLNERENEVTDK-KGKGKQKAEESTLTSDLENLREMLSELEQKTLDLK 326
>SPBC409.21 |sec66||ER protein translocation subcomplex subunit
Sec66 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 192
Score = 25.0 bits (52), Expect = 7.7
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +2
Query: 152 KNYYESLYKVND-SPLSITKSSL---ASEVAKAREHIKNSLECMDSVATLAGVPNTELIK 319
+N + SL + N + ++ K++L A+E + +K S ++++ GV + ELI+
Sbjct: 47 RNIFFSLLQQNPPAEDTLLKAALVLRATEGLRRLMKLKVSRMALNNLLNRGGVGD-ELIR 105
Query: 320 KIGSLEKENK 349
K G LEKE +
Sbjct: 106 KFGRLEKETE 115
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 302 NTELIKKIGSLEKENKDFKKAID 370
N+ LI IG + + KD+KKA+D
Sbjct: 532 NSVLITCIGMIYERCKDYKKALD 554
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,695,668
Number of Sequences: 5004
Number of extensions: 28997
Number of successful extensions: 153
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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