Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G03
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244,408... 33 0.16
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 32 0.37
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 31 0.48
01_06_1261 - 35826513-35828941,35829201-35829294 31 0.64
03_06_0516 - 34461975-34463456 30 1.1
01_06_0255 - 27918447-27918534,27918615-27918685,27919131-279192... 30 1.5
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 29 2.6
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 29 2.6
08_02_1482 - 27428208-27428514,27428605-27428906,27431176-274322... 28 6.0
06_02_0047 - 10938480-10938599,10939244-10939405,10939481-109396... 28 6.0
03_01_0580 + 4293079-4293582,4293797-4294037,4294982-4295160,429... 28 6.0
02_04_0353 + 22287313-22287448,22287573-22287702,22288605-22289367 28 6.0
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 28 6.0
01_03_0233 + 14042548-14044950 28 6.0
12_02_0461 - 19368409-19368627 27 7.9
01_05_0592 - 23483834-23484285,23484357-23484455,23484534-234847... 27 7.9
>11_01_0521 +
4083594-4083763,4083765-4083963,4084059-4084244,
4085834-4086025,4086979-4087200,4089238-4089444,
4089681-4090082,4090201-4090230,4090307-4090318
Length = 539
Score = 33.1 bits (72), Expect = 0.16
Identities = 25/104 (24%), Positives = 41/104 (39%)
Frame = +2
Query: 110 EKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATL 289
E W++ N + E Y + L I SE+ + NSL ++
Sbjct: 65 ETAWMELGFSNSGPRGVTEITYLLRSHELKI------SELESKEQIYCNSLVQLEERIAS 118
Query: 290 AGVPNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLE 421
+L+ ++ E+ N + L+NL SL+ RVD LE
Sbjct: 119 LEYYKEKLLTRLSWTEEANSTLRSDNSKLKNLAYSLKERVDELE 162
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 31.9 bits (69), Expect = 0.37
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 203 TKSSLASEVAKAR-EHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLR 379
T + L S A A E ++ ++ M++ A + +I L EN+ K IDDL+
Sbjct: 407 TSNHLESVGAVAELEKLRREMKMMEAALQGAARQSQSKADEIARLMNENEQLKSTIDDLK 466
Query: 380 NLVISLQARVDNLESSGGVAISTSKAPVPTTSKE 481
+ S +A +D L+ ++T + V +KE
Sbjct: 467 SK--SAEAEMDALKDEYHQRVATLERKVYALTKE 498
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 302 NTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAISTSKAPVPTTSK 478
N +L+K+ L K+ ++ K I L+ + L+ + NLE+ V + A P+T+K
Sbjct: 1813 NEDLLKRNDDLIKKIEESSKTITQLQETLQRLEGKSTNLEAENQVLRQQATATPPSTAK 1871
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 31.1 bits (67), Expect = 0.64
Identities = 28/105 (26%), Positives = 46/105 (43%)
Frame = +2
Query: 137 YNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELI 316
+ D E + S + +D + K L K ++ ++S E S LAG + E++
Sbjct: 279 HQDIEFSSIPSSIEDSDLIMKDCKLELQELSQKVKQKFESSSEA--SAVHLAGQVD-EIV 335
Query: 317 KKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAISTS 451
K+ SLE I+ ++N LQ R+D+LE I S
Sbjct: 336 DKVISLEIAASSQNAQINRMKNEADELQKRLDSLEDEKAALIEDS 380
>03_06_0516 - 34461975-34463456
Length = 493
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +2
Query: 206 KSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNL 385
+S+ A+ VAK R + SVAT +P I L + ++ A+DDLR
Sbjct: 153 RSADAAVVAKLRHLARLRDRFRRSVATGGHIPGP--IPTAPPLREAVAPYEAALDDLRRQ 210
Query: 386 VISLQARVDNLESSGGVA 439
+ + QA VD L+ VA
Sbjct: 211 LQAKQAEVDGLKEKLAVA 228
>01_06_0255 -
27918447-27918534,27918615-27918685,27919131-27919226,
27919335-27919403,27919489-27919629,27919708-27919761,
27920183-27920236,27920343-27920386,27921012-27921117,
27921197-27921258,27921358-27921679
Length = 368
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 308 ELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAI 442
ELI +I + +K ++ +K DDL+N+ + QA ES G+ +
Sbjct: 266 ELITRIKNKKKLLQEIEKQFDDLQNITLRNQASQRPAESVNGILL 310
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 302 NTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLE 421
N +LI++ L N D K I+D +V LQA ++ +E
Sbjct: 1638 NEDLIRRNDDLLSRNDDLIKKIEDSGQVVAELQAALERIE 1677
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 29.1 bits (62), Expect = 2.6
Identities = 23/108 (21%), Positives = 46/108 (42%)
Frame = +2
Query: 146 AEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKI 325
A K E+ + ++P+ + + + + E +K L+ A E ++
Sbjct: 938 ARKAIEEAPPVIKETPVLVEDTEKINSLTAEVEQLKALLQTERQATETAKKEYAEAERRN 997
Query: 326 GSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAISTSKAPVPT 469
L K+ + +K I+ L++ V L+ + N+ES V + A PT
Sbjct: 998 EELIKKFEGAEKKIEQLQDTVQRLEEKATNMESENKVLRQQAVAISPT 1045
>08_02_1482 -
27428208-27428514,27428605-27428906,27431176-27432228,
27432305-27432421,27432510-27432843,27433064-27433188,
27433408-27433475,27433555-27433636,27433753-27433866,
27433942-27434042,27434145-27434234,27434615-27434819
Length = 965
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 167 SLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVA 283
SLY ND+P S+ +S + EV+ + + + +D VA
Sbjct: 687 SLYPENDNPSSVDRSEFSGEVSS--DEVVKDMSTIDEVA 723
>06_02_0047 -
10938480-10938599,10939244-10939405,10939481-10939629,
10939753-10939912
Length = 196
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 308 ELIKKIGSLEKENKDFKKAIDDLRNLVIS--LQARVDNLESSGGVA 439
E KKI L++E K K ++++NL+ S L NLE SG ++
Sbjct: 136 EAQKKIVKLKEEGKPLPKNFNEVKNLMGSTPLDVGRSNLEKSGQIS 181
>03_01_0580 +
4293079-4293582,4293797-4294037,4294982-4295160,
4295319-4295674,4295761-4296100
Length = 539
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 429 PEDSKLSTLACRLMTKLRKSSIA-FLKSLFSFSRLPI 322
P +L CRLMT L+K+ ++ F++S S+ +LP+
Sbjct: 292 PNQGIFRSLLCRLMTPLQKAGVSKFIESYLSW-KLPL 327
>02_04_0353 + 22287313-22287448,22287573-22287702,22288605-22289367
Length = 342
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 140 NDAEKNYYESLYKVNDSPLSITKSSLASEVAKARE 244
+D +K Y+ S+ + +S +S + SSL SEV E
Sbjct: 290 DDDDKGYWNSILNMVNSSMSSSSSSLTSEVVTDTE 324
>02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +2
Query: 209 SSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNLV 388
++L +E+ E +K + +++ E+ K L K+ D + I+ L N +
Sbjct: 980 TTLVNELTAENEKLKTLVASLETKIDETEQRFDEVKKAREELLKKATDAESKINGLTNTM 1039
Query: 389 ISLQARVDNLE 421
+SLQ ++ N+E
Sbjct: 1040 LSLQEKLTNME 1050
>01_03_0233 + 14042548-14044950
Length = 800
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 350 DFKKAIDDLRNLVISLQARVDNLESSGGVAISTSKAPV 463
DF +A+DDLR+L+ A +L S+ A+ +S AP+
Sbjct: 74 DFIRAVDDLRSLLADADALKGSL-SASHAALLSSAAPL 110
>12_02_0461 - 19368409-19368627
Length = 72
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 227 VAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQAR 406
+A R+ + + D V A VP L++ + E E A+D NLV L R
Sbjct: 1 MAGYRDRLAALMMTPDGVEEEATVPVMSLLEWLDGAESEEAALSVAVDGFANLVEQLVGR 60
Query: 407 VDNLESSGG 433
E+ GG
Sbjct: 61 RQG-ETGGG 68
>01_05_0592 -
23483834-23484285,23484357-23484455,23484534-23484702,
23485049-23485363,23485561-23485767,23485852-23486106,
23486575-23486736
Length = 552
Score = 27.5 bits (58), Expect = 7.9
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Frame = +2
Query: 194 LSITKSSL--ASEVAKAREHIKNSLECMDSVATLAGVPN----TELIKKIGSLEKENKDF 355
L T++ L E+A+ EH + D +A L+G TEL K+I +LEK+ +
Sbjct: 336 LEATRAQLHETRELARKTEH-----DLRDRIAELSGSSKAAKITELEKRIKALEKDKGEL 390
Query: 356 KK----AIDDLRNLVISLQARVDNL 418
K A+ D+ + I QA+ D L
Sbjct: 391 TKKRDSALKDVEDRKIKSQAQFDVL 415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,436,745
Number of Sequences: 37544
Number of extensions: 161658
Number of successful extensions: 542
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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