Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G03
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 33 0.14
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 33 0.14
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 33 0.19
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 33 0.19
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 31 0.58
Z70309-9|CAH10784.1| 323|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 30 1.3
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 30 1.3
AL032663-2|CAA21759.1| 94|Caenorhabditis elegans Hypothetical ... 30 1.3
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 30 1.3
Z75550-4|CAA99923.2| 335|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z74476-5|CAA98965.1| 325|Caenorhabditis elegans Hypothetical pr... 29 2.3
U20861-16|AAA62300.1| 331|Caenorhabditis elegans Dynactin compl... 29 2.3
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 3.1
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 3.1
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 3.1
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z69637-3|CAA93468.1| 173|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z35595-6|CAA84637.1| 682|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 28 5.4
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 28 5.4
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 5.4
Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical pr... 27 7.1
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 7.1
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 7.1
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 7.1
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z79757-6|CAB02127.1| 350|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 9.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 9.4
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +2
Query: 203 TKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRN 382
T ++A+ + E I + ++ + N + +K LE+ K ++K IDDL+
Sbjct: 47 TLEAMAAGNDRENEEIMRLSKAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 106
Query: 383 LVISLQARVDNLESSGGVAISTSKAPVPTTSKE 481
+V SL NL ++ + + +PV T+ +E
Sbjct: 107 MVKSLVNENRNLSTTVSSLPNHADSPVSTSMRE 139
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +2
Query: 203 TKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRN 382
T ++A+ + E I + ++ + N + +K LE+ K ++K IDDL+
Sbjct: 56 TLEAMAAGNDRENEEIMRLSKAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 115
Query: 383 LVISLQARVDNLESSGGVAISTSKAPVPTTSKE 481
+V SL NL ++ + + +PV T+ +E
Sbjct: 116 MVKSLVNENRNLSTTVSSLPNHADSPVSTSMRE 148
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +2
Query: 203 TKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRN 382
T ++A+ + E I + ++ + N + +K LE+ K ++K IDDL+
Sbjct: 47 TLEAMAAGNDRENEEIMRLSKAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 106
Query: 383 LVISLQARVDNLESSGGVAISTSKAPVPTTSKE 481
+V SL NL ++ + + +PV T+ +E
Sbjct: 107 MVKSLVNENRNLSTTVSSLPNHADSPVSTSMRE 139
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +2
Query: 203 TKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRN 382
T ++A+ + E I + ++ + N + +K LE+ K ++K IDDL+
Sbjct: 56 TLEAMAAGNDRENEEIMRLSKAVERLEQEKHQRNQQHLKFEEELEQVEKTYRKDIDDLQQ 115
Query: 383 LVISLQARVDNLESSGGVAISTSKAPVPTTSKE 481
+V SL NL ++ + + +PV T+ +E
Sbjct: 116 MVKSLVNENRNLSTTVSSLPNHADSPVSTSMRE 148
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +2
Query: 176 KVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDF 355
K N++ L S + ++ KA+++++ +L + + +E +KI EN+
Sbjct: 269 KGNEASLKEEISRIRDDIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKIS----ENEKV 324
Query: 356 KKAIDDLRNLVISLQARVDNL 418
+K +DDL+N I LQ ++ L
Sbjct: 325 QKMVDDLKN-KIELQKQIHGL 344
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +2
Query: 176 KVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDF 355
K N++ L S + ++ KA+++++ +L + + +E +KI EN+
Sbjct: 269 KGNEASLKEEISRIRDDIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKIS----ENEKV 324
Query: 356 KKAIDDLRNLVISLQARVDNL 418
+K +DDL+N I LQ ++ L
Sbjct: 325 QKMVDDLKN-KIELQKQIHGL 344
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 0.58
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +2
Query: 206 KSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNL 385
K++L E+ R+ I + + DS ++ L ++ L++ N+D + + D R+
Sbjct: 90 KTALNLEIESLRDRITSKADVGDSTEAFRAQIDS-LKEENRQLQQSNRDRDREMADQRDR 148
Query: 386 VISLQARVDNLESSGGVAISTSKAPVPTTSKE 481
+L +RVD L A+S KA + T +E
Sbjct: 149 FENLASRVDTLTRERD-ALSEHKAQLEDTIRE 179
>Z70309-9|CAH10784.1| 323|Caenorhabditis elegans Hypothetical
protein R102.10 protein.
Length = 323
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 98 VLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIK 253
VL + WLDKN +K +S K DS SSL+ + ++ E ++
Sbjct: 78 VLSYTITWLDKNASKKTDKASIKSSTKTRDSQRKSVTSSLSDDSSETDEPVQ 129
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.3
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Frame = +2
Query: 98 VLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLE---- 265
V + + KN + AE Y +L V+ P+ I +AK + I+NSLE
Sbjct: 118 VFVVDSAAFSKNARDVAELFYTVALENVDKVPILIACHKQDLSLAKTEKVIRNSLEKEIG 177
Query: 266 --CMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSG 430
A L G +E +K +L DFK +DL+ +S + N E G
Sbjct: 178 LINKSRAAALIGTDGSE--EKRSTLTDTGIDFK--WEDLKKQEVSFVSTSSNSEDFG 230
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 155 NYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTELIKKIGSL 334
N E L+K + + K L SE A + N S AT+ GVPN EL+ KI
Sbjct: 409 NEDEELFKKRTNEIDFLKK-LKSEPASYWVQLVNKYFTAPS-ATVIGVPNEELVDKIAEE 466
Query: 335 EKE 343
E++
Sbjct: 467 EEK 469
>AL032663-2|CAA21759.1| 94|Caenorhabditis elegans Hypothetical
protein Y75B12B.3 protein.
Length = 94
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 317 KKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGG 433
+K +LEK K+ + +D+L+ ++ LQA+++NL GG
Sbjct: 47 QKSENLEKL-KESRGDLDNLQKKIVELQAKIENLSKLGG 84
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 104 IHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVA 283
I +K +DK + +A + ++ K+ S T VA + E KN E +DSV+
Sbjct: 65 IKDKNVMDKTIQLEANLSK-NAIKKIESS----TADGFQFNVAYSLEK-KNRWETVDSVS 118
Query: 284 TLAGVP---NTELIKKIGSLEK 340
LAG P N+E+++ IG +K
Sbjct: 119 LLAGAPENLNSEVVENIGFHKK 140
>Z75550-4|CAA99923.2| 335|Caenorhabditis elegans Hypothetical
protein T22C1.6 protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 284 TLAGVPNTE----LIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAISTS 451
+L GVP+ E LIKK+ EK+N + K + D +V LE + + + T
Sbjct: 13 SLEGVPDAEKVQKLIKKLAESEKQNAELKIKVLDYDKVVKVKDLTEKKLERNNQILLRTE 72
Query: 452 KA 457
+A
Sbjct: 73 EA 74
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 107 HEKVWLDKNVYNDAEKNYYE 166
HE+ W+ K V KNYYE
Sbjct: 523 HERQWITKQVSEQTSKNYYE 542
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 107 HEKVWLDKNVYNDAEKNYYE 166
HE+ W+ K V KNYYE
Sbjct: 523 HERQWITKQVSEQTSKNYYE 542
>Z74476-5|CAA98965.1| 325|Caenorhabditis elegans Hypothetical
protein W05B10.5 protein.
Length = 325
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 193 RRIIYLVQGFIVVLFSIIVNILV*PNLLMD 104
RR+I+LV FI+V+F+ IL+ L+ D
Sbjct: 181 RRVIFLVSMFIIVIFTTFCGILLFLKLIAD 210
>U20861-16|AAA62300.1| 331|Caenorhabditis elegans Dynactin complex
component protein2 protein.
Length = 331
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 164 ESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNTE-LIKKIGSLEK 340
E+L K + L++T S + +AK R H + + + V T AG TE +K+ +
Sbjct: 43 EALKKYKNRVLNLTSSDFSDSIAKKRRHAFGNNQYVLEV-TGAGFSGTETAAEKLNRILY 101
Query: 341 ENKDFKKAIDDLRNLVIS-LQARV-DNLE 421
E D + I NL L A V +NLE
Sbjct: 102 EVADLNEQIRADENLKTDLLNAEVLENLE 130
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 3.1
Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Frame = +2
Query: 77 SNYSKMSVLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKN 256
+++S + + +D +V+N ++K YK +D LS + ++ EV+ A ++ N
Sbjct: 1608 TSHSGKHIFDESNISMD-DVFNTSQK------YK-SDEKLSSPERTVEPEVSTATMNLDN 1659
Query: 257 SLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDL--RNLVISLQARVDNLE--- 421
+ +AT NT+++++ ++K ++FKK ++L + V+ + VDN +
Sbjct: 1660 IIFA-SGIATRE--ENTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVDNSDVKE 1716
Query: 422 -SSGGVAISTSKAPVPTTSKEP 484
+ V I + +SK P
Sbjct: 1717 HRTSAVNIDLDDVFIQRSSKHP 1738
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/100 (23%), Positives = 53/100 (53%)
Frame = +2
Query: 77 SNYSKMSVLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKN 256
+++S + + +D +V+N ++K YK +D LS + ++ EV+ A ++ N
Sbjct: 1971 TSHSSKHIFDESNISMD-DVFNTSQK------YK-SDEKLSTPERTVEPEVSTATMNLDN 2022
Query: 257 SLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDL 376
+ +AT NT+++++ ++K ++FKK ++L
Sbjct: 2023 IIFA-SGIATRE--KNTDVLEEEERIQKRVEEFKKTTENL 2059
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 3.1
Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Frame = +2
Query: 77 SNYSKMSVLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKN 256
+++S + + +D +V+N ++K YK +D LS + ++ EV+ A ++ N
Sbjct: 1608 TSHSGKHIFDESNISMD-DVFNTSQK------YK-SDEKLSSPERTVEPEVSTATMNLDN 1659
Query: 257 SLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDL--RNLVISLQARVDNLE--- 421
+ +AT NT+++++ ++K ++FKK ++L + V+ + VDN +
Sbjct: 1660 IIFA-SGIATRE--ENTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVDNSDVKE 1716
Query: 422 -SSGGVAISTSKAPVPTTSKEP 484
+ V I + +SK P
Sbjct: 1717 HRTSAVNIDLDDVFIQRSSKHP 1738
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/100 (23%), Positives = 53/100 (53%)
Frame = +2
Query: 77 SNYSKMSVLIHEKVWLDKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKAREHIKN 256
+++S + + +D +V+N ++K YK +D LS + ++ EV+ A ++ N
Sbjct: 1971 TSHSSKHIFDESNISMD-DVFNTSQK------YK-SDEKLSTPERTVEPEVSTATMNLDN 2022
Query: 257 SLECMDSVATLAGVPNTELIKKIGSLEKENKDFKKAIDDL 376
+ +AT NT+++++ ++K ++FKK ++L
Sbjct: 2023 IIFA-SGIATRE--KNTDVLEEEERIQKRVEEFKKTTENL 2059
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 323 IGSLEKENKDFKKAIDDLRNLVISLQARVD 412
I SLEK+ + F K +DD + V +Q +D
Sbjct: 1446 IASLEKKQRAFDKIVDDWKRKVDDIQKEID 1475
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 323 IGSLEKENKDFKKAIDDLRNLVISLQARVD 412
I SLEK+ + F K +DD + V +Q +D
Sbjct: 1446 IASLEKKQRAFDKIVDDWKRKVDDIQKEID 1475
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 323 IGSLEKENKDFKKAIDDLRNLVISLQARVD 412
I SLEK+ + F K +DD + V +Q +D
Sbjct: 1446 IASLEKKQRAFDKIVDDWKRKVDDIQKEID 1475
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 329 SLEKENKDFKKAIDDLRN 382
SLEK N+D KK IDD+++
Sbjct: 271 SLEKSNEDIKKEIDDMKS 288
>Z69637-3|CAA93468.1| 173|Caenorhabditis elegans Hypothetical
protein F35G2.3 protein.
Length = 173
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 164 ESLYKVNDSPLSITKSSLASEVAKAREHIKNSLECMDSVATLAGVPNT---ELIKKIGSL 334
E + K + + I +S +++ + K R H ++ + + + N EL +K+ SL
Sbjct: 42 EEMIKEHQKEMKIERSKISNHLIKIRMHQRDFVAKIGGLQRKLKERNEVIKELSQKLESL 101
Query: 335 EKENKDFKKAIDDL 376
E +D + +DDL
Sbjct: 102 EFAEEDANELVDDL 115
>Z35595-6|CAA84637.1| 682|Caenorhabditis elegans Hypothetical
protein C01G6.6a protein.
Length = 682
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Frame = +2
Query: 86 SKMSVLIHEKVWLDKNVYNDAEKN--YYESLYKVNDSPLSITKSSLASEV---AKAREHI 250
S++ + + E + D + +K + L K D L +S S++ A+
Sbjct: 582 SELEMFVSEGILTDLIICESEQKGERVQDGLRKYLDKVLPFLTASTESKIFICGDAKGMS 641
Query: 251 KNSLECM-DSVATLAGVPNTELIKKIGSLEKENK 349
K+ +C D VA+ G+P+ E KK+ L+K ++
Sbjct: 642 KDVWQCFSDIVASDQGIPDLEAKKKLMDLKKSDQ 675
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 348 LFSFSRLPIFLISSVLGTPANVATLSIHSKEFLICSLAFAT 226
+F F+ IF + S+L P + LSI + +FL+ +L AT
Sbjct: 78 MFEFTH-SIFTLLSILPNPTDAENLSIRTIKFLLNTLTKAT 117
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 348 LFSFSRLPIFLISSVLGTPANVATLSIHSKEFLICSLAFAT 226
+F F+ IF + S+L P + LSI + +FL+ +L AT
Sbjct: 78 MFEFTH-SIFTLLSILPNPTDAENLSIRTIKFLLNTLTKAT 117
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 134 VYNDAEKNYYESLYKVNDSPLSITKSS 214
V+N AE YY+ YK+N+ L + K+S
Sbjct: 724 VFNGAEAVYYKYGYKLNELALKLLKTS 750
>Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical
protein F25H9.2 protein.
Length = 310
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 311 LIKKIGSLEKENKDFKKAIDDLRNLVISLQAR 406
++KKIG EK DF D+L NL++ + +
Sbjct: 122 IVKKIGIREKRIHDFTVPRDNLTNLILIVDGK 153
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = +2
Query: 317 KKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLE 421
K + L+ E + + KA+++L+++ L+ +++NLE
Sbjct: 1149 KHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLE 1183
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = +2
Query: 317 KKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLE 421
K + L+ E + + KA+++L+++ L+ +++NLE
Sbjct: 1222 KHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLE 1256
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = +2
Query: 317 KKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLE 421
K + L+ E + + KA+++L+++ L+ +++NLE
Sbjct: 1222 KHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLE 1256
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.4
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 125 DKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKA-REHIKNSL-ECMDSVATLAGV 298
DK + E N + L ++ D+ + + + ++ + R+ N L E VA G
Sbjct: 2061 DKLPKFNEEWNAMQELIQLADALVDEAERYESDQIPQMDRKSAPNVLGELRKRVANAEG- 2119
Query: 299 PNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAIS 445
P +L+KK+ L ++ D+R V ++ R + + G AIS
Sbjct: 2120 PVIDLVKKLSQLVPRMQEDSPKSQDIRQKVYGIEDRFRRVGQAEGAAIS 2168
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.4
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 125 DKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKA-REHIKNSL-ECMDSVATLAGV 298
DK + E N + L ++ D+ + + + ++ + R+ N L E VA G
Sbjct: 2061 DKLPKFNEEWNAMQELIQLADALVDEAERYESDQIPQMDRKSAPNVLGELRKRVANAEG- 2119
Query: 299 PNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAIS 445
P +L+KK+ L ++ D+R V ++ R + + G AIS
Sbjct: 2120 PVIDLVKKLSQLVPRMQEDSPKSQDIRQKVYGIEDRFRRVGQAEGAAIS 2168
>Z79757-6|CAB02127.1| 350|Caenorhabditis elegans Hypothetical
protein F55B12.6 protein.
Length = 350
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 357 LKSLFSFSRLPIFLISSVLGTPANVATLSIHSKEF-LICSLAFATSLANDDL 205
LK+LF + +PI L+ +GT + L++ S+EF +L +A A D L
Sbjct: 265 LKALFLQALIPILLMYLPVGTYMTLPALNLDSEEFSKFVTLLYAIYPAIDPL 316
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 116 VWLDK--NVYNDAEKNYYESLYKVNDSPLSITKSSLASEVA 232
+W+ K V D K +Y+S+ K ++ PLS S EV+
Sbjct: 321 IWMRKPNQVEEDEYKQFYKSITKDSEEPLSHVHFSAEGEVS 361
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.4
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 125 DKNVYNDAEKNYYESLYKVNDSPLSITKSSLASEVAKA-REHIKNSL-ECMDSVATLAGV 298
DK + E N + L ++ D+ + + + ++ + R+ N L E VA G
Sbjct: 2061 DKLPKFNEEWNAMQELIQLADALVDEAERYESDQIPQMDRKSAPNVLGELRKRVANAEG- 2119
Query: 299 PNTELIKKIGSLEKENKDFKKAIDDLRNLVISLQARVDNLESSGGVAIS 445
P +L+KK+ L ++ D+R V ++ R + + G AIS
Sbjct: 2120 PVIDLVKKLSQLVPRMQEDSPKSQDIRQKVYGIEDRFRRVGQAEGAAIS 2168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,311,165
Number of Sequences: 27780
Number of extensions: 157134
Number of successful extensions: 677
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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