Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_G03
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.7  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    22   3.7  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   4.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   4.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   4.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 FSFSRLPIFLISSVLGTPANVA 280
           F F    + ++ S++GTP ++A
Sbjct: 741 FGFCITEVMMLGSIVGTPVHMA 762


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 345 FSFSRLPIFLISSVLGTPANVA 280
           F F    + ++ S++GTP ++A
Sbjct: 779 FGFCITEVMMLGSIVGTPVHMA 800


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 324 IFLISSVLGTPANVATLSIHSKEFLI 247
           IFL +  L TP+N+  +++   +FL+
Sbjct: 42  IFLSTKSLRTPSNLFVINLAISDFLM 67


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 366 IAFLKSLFSFSRLPIFLISSVLGTPANVATLSIHSKEFLI 247
           + F+ ++ +   + IFL +  L TP+N+  +++    FL+
Sbjct: 62  LGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLM 101


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 143 HCKHSCLTKPSHGLRQTFLS 84
           HC H CL  P    +   LS
Sbjct: 42  HCSHLCLPAPRINSKSPLLS 61


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 143 HCKHSCLTKPSHGLRQTFLS 84
           HC H CL  P    +   LS
Sbjct: 42  HCSHLCLPAPRINSKSPLLS 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,506
Number of Sequences: 438
Number of extensions: 1974
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)