Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G02
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 51 6e-07
01_01_1152 + 9170628-9171899 40 0.002
11_02_0014 - 7352619-7352918,7353173-7353418 36 0.024
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 33 0.13
03_05_0294 + 22855503-22855946,22856346-22856399 32 0.30
11_01_0767 + 6438648-6438809,6439146-6440000 32 0.40
11_02_0011 - 7337618-7338496,7338596-7338991 31 0.92
11_01_0750 - 6315126-6315896,6316371-6316784 30 1.2
11_02_0012 - 7346282-7347136,7347234-7347593 29 2.1
09_02_0338 + 7426999-7428322,7428390-7428646 29 2.1
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 29 2.1
10_08_1040 + 22503641-22503681,22503838-22504299,22506952-225073... 29 2.8
04_04_0619 + 26652923-26653267,26653440-26654273 29 2.8
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 3.7
03_06_0584 + 34909800-34910261 28 6.5
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 27 8.5
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 27 8.5
04_01_0270 + 3607971-3608492,3608883-3608891 27 8.5
01_06_1777 + 39818212-39819696 27 8.5
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 51.2 bits (117), Expect = 6e-07
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Frame = +2
Query: 152 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNP 325
DKN+ SPL + + L AGA + +I FLG G +++L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 326 D------YFTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQWAN 481
AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 482 EKTRGHIKSPISDDP*IRMQLPALFNVIFFQGHWHVPF 595
T G IK + D R L N ++F+G W F
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKF 188
>01_01_1152 + 9170628-9171899
Length = 423
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Frame = +2
Query: 155 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGV-ANPYISLSKTFSEMNPDY 331
+N + SPL + L GA ++ E+ FLG+ + + +P L +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 332 FTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFS-DTKKAADIINQWANEKTRGHIK 505
F ++V L +F +Y + E DF+ ++A + +N + ++ T G I+
Sbjct: 119 FACG--VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 506 SPISDDP*IRMQLPALFNVIFFQGHWHVPF 595
+ + + L N + F+G W +PF
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPF 206
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 440 DTKKAADIINQWANEKTRGHIKSPISDDP*IRMQLPALFNVIFFQGHWHVPF 595
+ KK+ IN+W ++ T I + D R+ L N I+F+G W PF
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPF 133
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 33.5 bits (73), Expect = 0.13
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +2
Query: 155 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGN-GDYSGV---ANPYISL-SKTFSEM 319
+NV SPL + + + L AGAG +R ++ LG G G+ A + L S
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 320 NPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDF 436
A+ ++V +L + F + V +Y++E ++DF
Sbjct: 95 GGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 32.3 bits (70), Expect = 0.30
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +2
Query: 158 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFL---GNGDYSGV---ANPYISL-SKTFSE 316
NV SPL + + + L AGAG +R ++ L G G G+ A + L S
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSP 104
Query: 317 MNPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDFSDTKKAAD 460
A+ +++ + +L + F + V +Y++E ++DF TK D
Sbjct: 105 AGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF-QTKVLRD 152
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 398 VRQYQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDP*IRMQLPALFNVIFFQ 574
V Y+ T+DF + +A IN W T+ I I + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 575 GHWHVPF 595
G W PF
Sbjct: 99 GEWLAPF 105
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 30.7 bits (66), Expect = 0.92
Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 9/159 (5%)
Frame = +2
Query: 146 SKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY-----ISLSKTF 310
S +KN+V SP + + L AGA + E+ LG + + L+
Sbjct: 28 SSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADES 87
Query: 311 SEMNPDYFTMANKIYVGNKYTLDEK---FTITVRQYQSEVETIDFS-DTKKAADIINQWA 478
+ P +++ V + TL+ K Y++ +F K++ IN+W
Sbjct: 88 ASGGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 479 NEKTRGHIKSPISDDP*IRMQLPALFNVIFFQGHWHVPF 595
++ T I + D L N I+F+G W PF
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPF 183
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 30.3 bits (65), Expect = 1.2
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Frame = +2
Query: 164 VSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNPDYFT 337
VS+P V + + L GA +R ++ + LG G G A+ S+ + D T
Sbjct: 36 VSAP-AVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDRST 94
Query: 338 -------MANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKK-AADIINQWANEKT 490
A ++ +L +F + Y S + DF + + A D IN W + T
Sbjct: 95 SGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDST 154
Query: 491 RGHIKSPISDDP*IRMQLPALFNVIFFQGHW 583
+G + + + + L + ++F+G W
Sbjct: 155 KGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 446 KKAADIINQWANEKTRGHIKSPISDDP*IRMQLPALFNVIFFQGHWHVPF 595
K + IN+W ++ T I+ + D L N I+F+G W PF
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPF 171
>09_02_0338 + 7426999-7428322,7428390-7428646
Length = 526
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 233 HDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTFP 129
H+YLH+ + E + +SRLMV+ +C ++ + P
Sbjct: 379 HNYLHKERNDLERIYNSRLMVQHTRNCVTLPHRNP 413
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -2
Query: 231 RLPSPAPALYRSISIITPNGEDTTFLSFDDVYVSLRNCKEVLSMASPKAVLLYSWSE 61
R+P P P L+ ++S+I L+F Y + C + + + P+ L W +
Sbjct: 40 RIPLPGPPLFYNVSLIMSRRSRCVLLAFGYAYPAY-ECYKTVELNKPEIEQLIFWCQ 95
>10_08_1040 +
22503641-22503681,22503838-22504299,22506952-22507361,
22507484-22507640,22507718-22507937,22508053-22508106,
22508193-22508272,22508359-22508636,22509193-22509515,
22509590-22509853,22510453-22510860
Length = 898
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 266 NLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTF 132
NL+ +C H + RRQL T+ SS + +S PS Y+F
Sbjct: 799 NLNSSSSCGEEHWRMKRRQLETQQDESSYSAKQKSYSYPSTSYSF 843
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 29.1 bits (62), Expect = 2.8
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 3/153 (1%)
Frame = +2
Query: 134 TYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFS 313
T ++ N + SPLG+ + L G + ++ FLG+ + + + +
Sbjct: 13 TKAITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGS---QHIHQLNAASAGLLA 69
Query: 314 EMNP-DYFTMANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADI-INQWANE 484
EM + A I+V L +F T + + ++DF + AA +N++ ++
Sbjct: 70 EMRAWPQLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQ 129
Query: 485 KTRGHIKSPISDDP*IRMQLPALFNVIFFQGHW 583
T G + + IS L N + F+ W
Sbjct: 130 ATNGRLNNTISPGTFGSSTKCVLANAMHFKATW 162
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 305 FYLS*CTDWQPRYNLHCLKTC 243
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>03_06_0584 + 34909800-34910261
Length = 153
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 255 PKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYV 133
P + S +L A A Y+ + +ITP G++ F + DD Y+
Sbjct: 42 PSLKASSKKLDVSAMATYK-VKLITPEGQEHEFEAPDDTYI 81
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 227 SRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYV-GNKYT 373
S A+ D GD V + + L+ F E++PD+ ++N +Y+ G+ Y+
Sbjct: 152 SYADTDAGFRTGDTIAVHHILVFLNNWFQEVHPDF--LSNPLYIAGDSYS 199
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +2
Query: 332 FTMANKIYVGNKYTLDEKFTITVRQYQSEVETIDFSD--------TKKAADIINQWANEK 487
FT +K+ G+ T ++ + + S T+ ++ +KAAD IN+W N
Sbjct: 704 FTWYSKLAPGSIRTWEQMQDSFLEHFYSTQRTVGITELTQTEQRANEKAADFINRWRNLS 763
Query: 488 TRGHIKSPISDDP*IRM 538
H PI++ +RM
Sbjct: 764 L--HCPQPITEHEAVRM 778
>04_01_0270 + 3607971-3608492,3608883-3608891
Length = 176
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 562 NIEERGQLHSDLWVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNFALVLTDSDREF 383
N+E RGQL S + + F + LL+ + F G+ + N L+ D +EF
Sbjct: 43 NLENRGQLISSGVKVDNLVFRLVKKLLLRNNNRTTTTFVGLKQTNELAKILLKIDVPKEF 102
>01_06_1777 + 39818212-39819696
Length = 494
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 438 AIPKKQLTSLISGLMRRPEDILNLQSLMTHRSECSCPRSSMLYSSRVTGTC 590
++ + LTSLI+GL R L LQ L ++C P Y + V C
Sbjct: 148 SLASEDLTSLITGLCRARRPELALQVLDEMSNQCLAPEKD-AYRAIVPALC 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,124,496
Number of Sequences: 37544
Number of extensions: 338043
Number of successful extensions: 1018
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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