Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_G01
(384 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.18 |spo4||serine/threonine protein kinase Spo4|Schizosa... 28 0.58
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 25 4.1
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 25 4.1
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 25 5.4
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 25 5.4
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 24 7.1
SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe... 24 7.1
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe... 24 7.1
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe... 24 7.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 24 7.1
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 24 7.1
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe... 24 7.1
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe... 24 7.1
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 24 9.4
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 24 9.4
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 24 9.4
SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomy... 24 9.4
>SPBC21C3.18 |spo4||serine/threonine protein kinase
Spo4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 27.9 bits (59), Expect = 0.58
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 81 DVIVIRNNNYEKQVLKSDVHNPYQLAIDYQTSTISFSLSPEVNGKTVLKSAYFN 242
D+I N E +L++ LAID + S V KT L+ +FN
Sbjct: 351 DLIASITKNDENLILETSSDYQVALAIDLLDKLLELHPSKRVKAKTALQHEFFN 404
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.0 bits (52), Expect = 4.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 149 VRIVHVALENLFFIIVVPNYDNVTFLLISAFRE 51
VR+ AL N F VPNYD+V + + FR+
Sbjct: 290 VRLARPALINAFG---VPNYDSVVPMYTTVFRD 319
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 4.1
Identities = 16/85 (18%), Positives = 35/85 (41%)
Frame = +3
Query: 90 VIRNNNYEKQVLKSDVHNPYQLAIDYQTSTISFSLSPEVNGKTVLKSAYFNTKTNEYGEI 269
++R + E +L S PY + ++ + +SF + N V K + + ++
Sbjct: 316 IVRIDPKEATILNSAERVPYLIMVEVLSGELSFEPQSKKNKAKVQKIVSHKNQRKRWFDL 375
Query: 270 AGITNGMANAVDSIDHKVYLGGQDG 344
+ + N DS D+ + +G
Sbjct: 376 TDV-DPYTNLQDSTDNDISESESEG 399
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 24.6 bits (51), Expect = 5.4
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = -2
Query: 266 FSIFICFCIEVSGF*NSFTVHFGR*TERYCAGLVVDC*LVRIVHVALENLFFIIVVPNYD 87
FSIFI F S NSFTV +R C L++ LV + + Y
Sbjct: 523 FSIFITFLHVCSFGSNSFTVW----EDRLCHFLIITIGLVMFCK-CFSEMSPLFACSTYS 577
Query: 86 NVTFLLISAFREY 48
+ F+L+ Y
Sbjct: 578 ALAFILLQVISSY 590
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 5.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 99 NNNYEKQVLKSDVHNPYQLAIDYQTSTISFSLSPEVNGKTVLK 227
N + + L + ++L+ID + +SFS + +NGK ++K
Sbjct: 244 NEEPDTEALSQGNYTQFELSID--KADVSFSFARFLNGKGIVK 284
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 24.2 bits (50), Expect = 7.1
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +3
Query: 108 YEKQVLKSDVHNPYQLAIDYQTSTISFSLSPEVNGKTVLKSAYFNTKTN 254
Y V S ++AID+ + + F LS VN + YF N
Sbjct: 997 YVGSVATSYFSETAEMAIDFGIAQVEFFLSTVVNSFSAFALVYFAILAN 1045
>SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 24.2 bits (50), Expect = 7.1
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 11/69 (15%)
Frame = +3
Query: 123 LKSDVHNPYQLAIDYQ-----------TSTISFSLSPEVNGKTVLKSAYFNTKTNEYGEI 269
L D H P+Q+ ++Y TS P+ NG TV+K+ T N + +
Sbjct: 242 LSDDSHGPHQVGLNYHLAKSYLDKCGITSLCMIEKGPDGNG-TVVKNV---TVDNVWSKF 297
Query: 270 AGITNGMAN 296
G TNG+ N
Sbjct: 298 VG-TNGITN 305
>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 283 MAWLTLWTVSTTKFISEAKMEFTR---TITLP 369
M++ T W + +T AK+EF+ TI LP
Sbjct: 128 MSFFTAWVIFSTILTKRAKIEFSTFLPTILLP 159
>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 283 MAWLTLWTVSTTKFISEAKMEFTR---TITLP 369
M++ T W + +T AK+EF+ TI LP
Sbjct: 128 MSFFTAWVIFSTILTKRAKIEFSTFLPTILLP 159
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 66 DKKKCDVIVIRNNNYEKQVLKSDVHNPYQLAIDYQ 170
D+K+ +I R+N E + LKS++ + +L ++YQ
Sbjct: 1273 DEKRKALIASRDNE-ELRSLKSELESKRKLEVEYQ 1306
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 24.2 bits (50), Expect = 7.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 195 SPEVNGKTVLKSAYFNTKTNEYGE 266
SPEV+ + ++K + TKTNE E
Sbjct: 70 SPEVHFEPIVKLSAVETKTNEEEE 93
>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 283 MAWLTLWTVSTTKFISEAKMEFTR---TITLP 369
M++ T W + +T AK+EF+ TI LP
Sbjct: 128 MSFFTAWVIFSTILTKRAKIEFSTFLPTILLP 159
>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 283 MAWLTLWTVSTTKFISEAKMEFTR---TITLP 369
M++ T W + +T AK+EF+ TI LP
Sbjct: 128 MSFFTAWVIFSTILTKRAKIEFSTFLPTILLP 159
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 204 VNGKTVLKSAYFNTKTNEYGEIAGITNGMANAVDSI 311
+N +LK+ F+T TNEY + + N + N + ++
Sbjct: 367 LNQSVILKNIGFSTGTNEYRTL--MKNAIGNLIIAV 400
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 82 SHFFLSPPSANTNNQTKIRYFIS 14
SH+F+SP +N KI+Y +S
Sbjct: 1010 SHYFISPVLSNQVIDEKIQYSMS 1032
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 23.8 bits (49), Expect = 9.4
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 353 RVNSILASEINFVVDTVHSVSHAI-CDSGDFSIF-ICFCIEV 234
+ + + SE+NF ++ +HS+++ + DS SI I + +EV
Sbjct: 1305 KAKNCVLSELNFFLELLHSLNNGLPSDSHKTSIVCILYLLEV 1346
>SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 229 PLTSIQKQMNMEKSPESQMAWLTLWTVST 315
PL + + +SPES + L WT++T
Sbjct: 83 PLQLWPRLLKQLESPESTLRRLAAWTIAT 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,610,668
Number of Sequences: 5004
Number of extensions: 31549
Number of successful extensions: 100
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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