Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_G01
         (384 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64853-5|AAB04978.2|  460|Caenorhabditis elegans Hypothetical pr...    31   0.37 
Z99710-6|CAB16869.1|  362|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z73098-10|CAA97336.2|  391|Caenorhabditis elegans Hypothetical p...    27   6.0  
U70854-5|AAB09157.1|  589|Caenorhabditis elegans Dnaj domain (pr...    27   6.0  
Z81523-8|CAB04245.1|  290|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p...    26   7.9  
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p...    26   7.9  

>U64853-5|AAB04978.2|  460|Caenorhabditis elegans Hypothetical
           protein K11G9.5 protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 0.37
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 374 FLGSVIVRVNSILASEINFVVDTVHSVSHAICDSGDFS-IFICFCIEVSGF*NSFTVH 204
           F  ++ V +  +L   + F+  ++H VS  +     FS IF C C+ V+GF    T+H
Sbjct: 320 FFNTISVGLVGVLLGCLGFIPQSLHYVSVVL-----FSVIFSCLCLNVAGFYKCATLH 372


>Z99710-6|CAB16869.1|  362|Caenorhabditis elegans Hypothetical
           protein F08A8.6 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 116 TSSQERRAQSLPISNRLPDQHNIFQFISRSER*NCSKIRLLQYK 247
           T ++E R +     NRL + H  FQ + R    N  +++ L+Y+
Sbjct: 292 TPAEEARTRIEHYENRLKEMHGEFQHVRREADENREEVQRLRYE 335


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
            protein Y42A5A.1 protein.
          Length = 1045

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 3    NLLLEMKYLIFVWLFVFAEGGDKK--KCDVIVIRNNNYEKQVLKSD-VHNPY 149
            N +L++ Y   V+L  F +   K       ++ R  NYE++VLK+D V  PY
Sbjct: 949  NFILDLLYEDKVYLKEFVDKDRKSLFALQQLLYRKINYEEEVLKADEVFKPY 1000


>Z73098-10|CAA97336.2|  391|Caenorhabditis elegans Hypothetical
           protein T21C9.9 protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 87  IVIRNNNYEKQVLKSDVHNPYQLAIDYQTSTISFS----LSPEVNGKTVLKSAYFNTK 248
           + + N NY+  V ++ V     L+  Y    ++ S    + P V  KTV  +A+ NT+
Sbjct: 256 VEVANENYDDVVEETQVPVRTSLSPSYTPEVVTSSTVLFMEPRVEAKTVAPAAHENTE 313


>U70854-5|AAB09157.1|  589|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 11 protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 210 GKTVLKSAYFNTKTNEYGEIAGITNGMANAVDSIDHK 320
           G  + K  YF   T  Y ++ G+++    A DS+DHK
Sbjct: 137 GIVMEKEEYFTCITKAYEQV-GMSDVKRQAFDSVDHK 172


>Z81523-8|CAB04245.1|  290|Caenorhabditis elegans Hypothetical
           protein F32H2.8 protein.
          Length = 290

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 247 FVLK*ADFRTVLPFTSGDKLKDIVLV 170
           F++K ADF + LPF+S D +   +L+
Sbjct: 166 FLMKLADFESKLPFSSTDNVAIHILI 191


>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
            W05B2.4 protein.
          Length = 2265

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -1

Query: 174  WSGSR--LLIGKDCARRS*ELVFHNC-CSELR 88
            WS     LLIG+ C+ RS  L   NC CS LR
Sbjct: 1142 WSSGHIVLLIGEMCSTRSFVLRLANCMCSNLR 1173


>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
           protein C47E12.5b protein.
          Length = 1028

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 264 EIAGITNGMANAVDSIDHKVYL 329
           E  G  NG+ANA+D++D + Y+
Sbjct: 527 EFFGELNGVANALDNVDARRYM 548


>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
           protein C47E12.5a protein.
          Length = 1113

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 264 EIAGITNGMANAVDSIDHKVYL 329
           E  G  NG+ANA+D++D + Y+
Sbjct: 612 EFFGELNGVANALDNVDARRYM 633


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,878,136
Number of Sequences: 27780
Number of extensions: 175050
Number of successful extensions: 453
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)