Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F24
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    30   0.008
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   0.89 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   0.89 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   0.89 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   2.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   3.6  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   4.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   8.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   8.3  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 29.9 bits (64), Expect = 0.008
 Identities = 22/72 (30%), Positives = 28/72 (38%)
 Frame = +1

Query: 94  KDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRP 273
           K +P         P    C  EGN      SW KDG      +HN A+ + E        
Sbjct: 331 KIEPQVQTIDFGRPATFTCNFEGNPIKT-ISWLKDGHPI---DHNEAVLRIESV------ 380

Query: 274 QASDKGHYHCFV 309
           +  DKG Y CF+
Sbjct: 381 RKEDKGMYQCFI 392



 Score = 24.2 bits (50), Expect = 0.39
 Identities = 20/76 (26%), Positives = 30/76 (39%)
 Frame = +1

Query: 97   DQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQ 276
            D      +KE+    L CL  G    V  +W+  G  F   +     ++ +GSL      
Sbjct: 1313 DDTFTTTYKED--VTLPCLAVGLPPPV-ITWKIKGVQFTTSDK--IRQQPDGSLFIRDVS 1367

Query: 277  ASDKGHYHCFVETPAG 324
             ++ G Y C VE   G
Sbjct: 1368 RNNAGEYSCHVENDYG 1383



 Score = 23.0 bits (47), Expect = 0.89
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 31  AVLSACIIVGSALPVDKY-PV-LKDQPAEVLFKENNPTVLECLIEGN 165
           A++   +++G++   D   PV +++ P  + F      V+EC   GN
Sbjct: 4   AIIVTLLVLGASAEDDTSGPVFVREPPNRIDFSNTTGAVVECSAHGN 50



 Score = 23.0 bits (47), Expect = 0.89
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +1

Query: 226 NAALRKDEGSLVFLRPQASDKGHYHCFVETPAG 324
           N  +++  G+L+    +  D G Y C V    G
Sbjct: 282 NDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVG 314


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 263 NTRDPSSLRRAALCSCQLKDFPSFCQEYLTP*SFPSMRHS 144
           +T +P+ L    + + ++KDFPS       P  FPS+ +S
Sbjct: 217 HTGEPTDLTPEQIQAAEVKDFPS-------PGGFPSIHNS 249


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +3

Query: 51  NCGLSASRG*IPGAERPTGRGPLQGEQPNGPRMSHRRKRSGSQ 179
           +C L A+     G   PTG  PL  +  N   M H  +    Q
Sbjct: 135 SCKLQAAAVTQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQ 177


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +3

Query: 51  NCGLSASRG*IPGAERPTGRGPLQGEQPNGPRMSHRRKRSGSQ 179
           +C L A+     G   PTG  PL  +  N   M H  +    Q
Sbjct: 137 SCKLQAAAVTQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQ 179


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 43  ACIIVGSALPVDKYPVLKDQP--AEVLFKEN-NPTVLECLIE 159
           AC+ V  A P D+Y +  D     E+L  +      + CL+E
Sbjct: 10  ACVSVALARPEDQYTIKYDNVNLKEILQSDRLTENYVNCLLE 51


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 96  RPTGRGPLQGEQPNGPRMSHRRKR 167
           R TGRG     Q +GP+   R ++
Sbjct: 13  RSTGRGLKYSGQQHGPQSDSRNQQ 36


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 91  APGIYPREALSP 56
           +PGIY  ++LSP
Sbjct: 196 SPGIYSEQSLSP 207


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 246 IFAESSVMLLPVERFPILLPGVLDSLIVS 160
           +F  S ++L+P+ R+P +    L  LI++
Sbjct: 7   LFVLSPIILIPLFRWPKIGLSALGFLIIA 35


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 266 RNTRDPSSLRRAALCSCQLKDFPSFCQEYLTP*SFPSMRH 147
           +NTR  S   +A   S  +K   SFC++ L   S   + H
Sbjct: 292 QNTRVASEDFKAIWYSILIKKADSFCKKKLENYSLQLINH 331


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 275 KRLTRAITIASLKPQPVWPVQG 340
           +R+T  I I   KP+ V P  G
Sbjct: 142 RRITDPINIRKCKPKTVVPEVG 163


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 101 WSFSTGYL 78
           WSFSTG L
Sbjct: 162 WSFSTGLL 169


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 101 WSFSTGYL 78
           WSFSTG L
Sbjct: 180 WSFSTGLL 187


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 61  SALPVDKYPVLKDQPAEV 114
           SALPVDK   + ++ A +
Sbjct: 252 SALPVDKLLQISEEVANI 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,227
Number of Sequences: 336
Number of extensions: 1932
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)