BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_F23
(330 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63729-1|CAA45272.1| 798|Drosophila melanogaster proboscipedia ... 26 10.0
X63728-1|CAA45271.1| 798|Drosophila melanogaster proboscipedia ... 26 10.0
S94723-1|AAA08526.1| 798|Drosophila melanogaster proboscipedia ... 26 10.0
BT001715-1|AAN71470.1| 355|Drosophila melanogaster RE68078p pro... 26 10.0
AY075511-1|AAL68319.1| 355|Drosophila melanogaster RE63157p pro... 26 10.0
AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA... 26 10.0
AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain... 26 10.0
>X63729-1|CAA45272.1| 798|Drosophila melanogaster proboscipedia
protein.
Length = 798
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 2 GEHAITKHLPTNGLPYRYINTITERRMV 85
G+++IT+ +P NGLP R T +++
Sbjct: 184 GDNSITEFVPENGLPRRLRTAYTNTQLL 211
>X63728-1|CAA45271.1| 798|Drosophila melanogaster proboscipedia
protein.
Length = 798
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 2 GEHAITKHLPTNGLPYRYINTITERRMV 85
G+++IT+ +P NGLP R T +++
Sbjct: 184 GDNSITEFVPENGLPRRLRTAYTNTQLL 211
>S94723-1|AAA08526.1| 798|Drosophila melanogaster proboscipedia
protein.
Length = 798
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 2 GEHAITKHLPTNGLPYRYINTITERRMV 85
G+++IT+ +P NGLP R T +++
Sbjct: 184 GDNSITEFVPENGLPRRLRTAYTNTQLL 211
>BT001715-1|AAN71470.1| 355|Drosophila melanogaster RE68078p
protein.
Length = 355
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 278 TLWSRVMLERYRHHTAHTLLHITRRYLIS 192
+LW+ V ++RY HH H H T Y IS
Sbjct: 305 SLWAFVHMKRYHHH--HHFSHQTLGYGIS 331
>AY075511-1|AAL68319.1| 355|Drosophila melanogaster RE63157p
protein.
Length = 355
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 278 TLWSRVMLERYRHHTAHTLLHITRRYLIS 192
+LW+ V ++RY HH H H T Y IS
Sbjct: 305 SLWAFVHMKRYHHH--HHFSHQTLGYGIS 331
>AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA,
isoform A protein.
Length = 782
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 2 GEHAITKHLPTNGLPYRYINTITERRMV 85
G+++IT+ +P NGLP R T +++
Sbjct: 184 GDNSITEFVPENGLPRRLRTAYTNTQLL 211
>AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain
protein protein.
Length = 782
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 2 GEHAITKHLPTNGLPYRYINTITERRMV 85
G+++IT+ +P NGLP R T +++
Sbjct: 184 GDNSITEFVPENGLPRRLRTAYTNTQLL 211
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,443,176
Number of Sequences: 53049
Number of extensions: 250244
Number of successful extensions: 457
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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