BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_F21
(655 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 25 1.6
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 24 3.7
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 24 3.7
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 3.7
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 8.4
AY070255-1|AAL59654.1| 230|Anopheles gambiae glutathione S-tran... 23 8.4
AF513637-1|AAM53609.1| 214|Anopheles gambiae glutathione S-tran... 23 8.4
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 25.4 bits (53), Expect = 1.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 126 AQDYQLPEDKREQLKQMLTDQCKKYGAEDKVATVDAAGRA 245
A D L E K+ +LK+M K+Y + A+ +AG++
Sbjct: 154 AIDNLLEESKQRELKRMELAMVKQYRPDPAKASAPSAGKS 193
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 24.2 bits (50), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 126 AQDYQLPEDKREQLKQMLTDQCKKYGAEDKVATVDAAGRA 245
A D L E K+ +LK+M K+Y + A+ AG++
Sbjct: 154 AIDNLLEESKQRELKRMELAMVKQYRPDPAKASAPNAGKS 193
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 86 PDHDDTNTIVNTNEGTN 36
P + TNT + TNE +N
Sbjct: 454 PSEESTNTTITTNESSN 470
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 422 RTRPSRFSQEQYQPARRLHMLQRWRQNRFVHR*ER 526
+ R + Q+Q QP ++ LQR +Q + H+ +R
Sbjct: 253 KPRSQQQPQQQQQPQQKQQQLQRRQQQQQQHQGQR 287
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.0 bits (47), Expect = 8.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 369 NSCINSLLDGVSPCVDPNARGHLASVKNSTN 461
N+ NS G +DPN+ H + +TN
Sbjct: 488 NATANSTTTGAGGLLDPNSNFHKSLAAANTN 518
>AY070255-1|AAL59654.1| 230|Anopheles gambiae glutathione
S-transferase E5 protein.
Length = 230
Score = 23.0 bits (47), Expect = 8.4
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 370 IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLR 522
IA F+ + + A I SRT+P + +E +C SLR
Sbjct: 170 IATMEEFFPMDRSRYPALVAWIERLSRTLPEYDQLNQEGAVEFAEICESLR 220
>AF513637-1|AAM53609.1| 214|Anopheles gambiae glutathione
S-transferase D11 protein.
Length = 214
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 168 KQMLTDQCKKYGAEDKVATVDAAGRAFV 251
+ +LT C+KYG D + D RA V
Sbjct: 66 RAILTYLCEKYGKNDGLYPKDPKKRAVV 93
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,163
Number of Sequences: 2352
Number of extensions: 11041
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -